Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 1.9e-173 612.5 318 100.0
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 6.1e-164 580.9 319 94.0
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 5.0e-158 561.2 306 93.8
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.5e-158 560.8 306 93.5
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.7e-156 554.7 307 93.2
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 4.4e-154 548.1 318 85.2
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 1.3e-153 546.6 318 86.2
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.6e-142 507.3 311 86.2
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 7.3e-141 504.2 318 78.6
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 4.7e-140 501.5 317 77.9
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 7.5e-138 494.2 316 76.9
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 2.2e-137 492.7 315 75.9
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.9e-137 492.3 315 75.6
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 3.7e-137 491.9 317 75.1
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 3.7e-137 491.9 316 75.6
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.1e-136 490.3 315 75.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 4.1e-136 488.4 314 75.8
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.2e-135 486.9 314 75.8
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 4.6e-135 485.0 318 74.2
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.0e-134 483.8 318 73.9
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 1.0e-134 483.8 321 75.7
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 1.3e-134 483.4 317 73.8
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.0e-134 481.5 318 74.5
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.0e-134 481.5 318 74.5
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 8.6e-134 480.7 318 73.6
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.5e-133 479.9 318 74.5
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 4.3e-133 478.4 324 72.8
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 4.7e-132 474.9 318 73.3
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 8.0e-132 474.2 316 73.4
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 1.1e-131 473.8 315 74.6
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.4e-131 473.4 316 73.7
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.8e-131 473.0 318 73.3
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 5.2e-131 471.5 318 73.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 1.2e-130 470.3 318 73.6
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 3.4e-130 468.8 320 72.2
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 5.8e-130 468.0 316 73.1
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 1.3e-126 456.8 316 69.3
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-126 456.4 361 64.8
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 3.0e-126 455.7 316 69.3
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 3.9e-126 455.3 316 69.0
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 5.0e-126 454.9 304 72.7
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 6.6e-126 454.5 304 73.4
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 8.6e-126 454.1 316 69.0
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.1e-125 453.8 316 69.9
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.1e-125 453.8 318 70.4
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.9e-125 453.0 318 69.8
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.3e-125 452.2 317 70.3
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 9.5e-125 450.7 318 69.2
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.2e-124 450.3 318 70.1
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.1e-124 449.5 316 68.4
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.6e-124 448.7 316 68.4
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.6e-124 448.7 316 68.4
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 4.7e-124 448.4 318 70.1
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 4.7e-124 448.4 316 68.0
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 6.2e-124 448.0 338 67.5
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 3.1e-123 445.7 316 67.7
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.5e-122 443.4 318 67.9
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.4e-122 442.2 318 71.1
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 4.4e-122 441.8 317 67.2
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 7.5e-122 441.0 322 66.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 9.9e-122 440.7 317 67.2
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 2.2e-121 439.5 316 68.0
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 4.9e-121 438.3 317 66.9
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 7.1e-120 434.5 304 69.1
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 9.2e-120 434.1 297 71.0
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 2.1e-119 433.0 303 69.6
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 3.5e-119 432.2 325 65.8
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 4.6e-119 431.8 310 68.4
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 9.5e-117 424.1 318 67.6
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.2e-116 423.7 312 68.3
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 2.4e-115 419.5 318 67.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 6.8e-115 417.9 320 67.5
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 1.3e-113 413.7 318 64.8
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 1.7e-113 413.3 317 64.4
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.7e-113 413.3 314 65.0
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 2.9e-113 412.5 298 69.8
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.0e-110 404.1 339 63.1
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 1.0e-110 404.1 269 73.6
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 2.3e-110 402.9 318 66.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 7.3e-109 397.9 303 65.3
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.1e-107 394.0 318 62.6
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 3.2e-104 382.5 284 66.9
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 2.7e-103 379.4 315 62.9
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.3e-100 370.5 255 72.5
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 7.6e-98 361.3 316 59.5
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.1e-96 354.8 270 66.3
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.1e-96 354.8 270 66.3
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 9.3e-96 354.4 248 68.5
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 3.0e-94 349.4 238 69.3
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.8e-91 340.1 315 51.1
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.6e-87 327.0 322 49.7
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 7.6e-82 308.1 256 62.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.3e-81 307.4 212 69.8
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.8e-81 305.8 315 47.3
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.9e-80 303.5 315 47.3
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 1.3e-78 297.4 181 80.1
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.1e-77 294.3 194 71.6
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 4.3e-77 292.4 317 51.1
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 6.3e-76 288.5 216 66.2
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 1.7e-73 280.4 332 50.0
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.2e-73 280.0 238 58.0
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 9.4e-72 274.6 309 44.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.5e-64 250.0 268 48.9
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 5.5e-64 248.8 127 98.4
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 6.1e-63 245.4 129 96.9
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.5e-61 240.7 339 43.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 3.8e-57 226.1 146 75.3
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.6e-42 177.6 228 45.2
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 3.4e-37 159.8 88 96.6
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.7e-33 147.5 247 37.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 5.0e-33 146.0 103 69.9
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.7e-23 112.8 93 58.1
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.2e-21 108.2 210 36.7
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.5e-16 90.5 70 64.3
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.7e-10 70.5 72 47.2
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 3.6e-07 60.1 44 59.1
MELO3C033367.2 Cucumis melo HOM05D006919 ORTHO05D170968 6.8e-06 55.8 46 60.9


User provided reference genes

Program Settings