Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.8e-47 192.2 92 100.0
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 2.8e-45 184.9 93 97.8
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 9.4e-41 169.9 99 86.9
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.2e-40 169.5 99 86.9
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 4.7e-40 167.5 99 84.8
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 6.1e-40 167.2 99 85.9
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 5.0e-34 147.5 84 85.7
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 8.0e-32 140.2 89 76.4
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 3.0e-31 138.3 92 76.1
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 1.5e-30 136.0 78 79.5
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 3.3e-30 134.8 92 73.9
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 3.3e-30 134.8 92 73.9
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 5.7e-30 134.0 76 77.6
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 2.8e-29 131.7 74 79.7
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 4.8e-29 131.0 76 73.7
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 6.3e-29 130.6 76 77.6
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 8.2e-29 130.2 73 80.8
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.1e-28 129.8 75 77.3
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.4e-28 129.4 77 77.9
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 1.4e-28 129.4 81 71.6
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 1.8e-28 129.0 76 73.7
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.8e-28 129.0 75 80.0
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 1.8e-28 129.0 81 71.6
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 3.1e-28 128.3 80 71.2
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 5.3e-28 127.5 76 73.7
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 5.3e-28 127.5 76 73.7
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 7.0e-28 127.1 75 73.3
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 9.1e-28 126.7 69 82.6
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 1.2e-27 126.3 69 82.6
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.6e-27 125.9 84 72.6
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 1.6e-27 125.9 90 66.7
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.6e-27 125.9 75 73.3
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 2.0e-27 125.6 75 73.3
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 2.0e-27 125.6 88 62.5
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 2.0e-27 125.6 75 73.3
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 2.0e-27 125.6 75 73.3
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 2.7e-27 125.2 90 66.7
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 3.5e-27 124.8 88 68.2
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 3.5e-27 124.8 86 68.6
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 3.5e-27 124.8 78 73.1
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 5.9e-27 124.0 76 73.7
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 5.9e-27 124.0 82 69.5
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 5.9e-27 124.0 81 69.1
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 7.7e-27 123.6 82 70.7
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 1.0e-26 123.2 80 70.0
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 1.3e-26 122.9 100 64.0
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.7e-26 122.5 82 69.5
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 2.2e-26 122.1 87 64.4
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 2.2e-26 122.1 91 61.5
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 2.2e-26 122.1 70 77.1
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 2.9e-26 121.7 81 65.4
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 2.9e-26 121.7 81 65.4
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 2.9e-26 121.7 76 71.1
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 2.9e-26 121.7 130 53.1
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 3.8e-26 121.3 68 79.4
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 5.0e-26 120.9 81 66.7
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 6.5e-26 120.6 95 58.9
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 1.1e-25 119.8 73 74.0
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 1.1e-25 119.8 81 64.2
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.1e-25 119.8 82 65.9
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.5e-25 119.4 81 64.2
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 1.5e-25 119.4 68 82.4
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 1.9e-25 119.0 76 69.7
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 1.9e-25 119.0 76 69.7
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.9e-25 119.0 76 69.7
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 3.2e-25 118.2 81 64.2
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 3.2e-25 118.2 78 69.2
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 3.2e-25 118.2 75 73.3
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 3.2e-25 118.2 86 60.5
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 3.2e-25 118.2 75 72.0
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 4.2e-25 117.9 62 83.9
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 5.5e-25 117.5 81 64.2
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 5.5e-25 117.5 81 65.4
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 5.5e-25 117.5 81 63.0
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 5.5e-25 117.5 81 65.4
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 9.4e-25 116.7 83 62.7
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 1.2e-24 116.3 81 63.0
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 6.1e-24 114.0 81 61.7
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 1.0e-23 113.2 75 72.0
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.8e-23 112.5 80 66.2
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.0e-23 111.7 69 72.5
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 2.0e-22 109.0 84 59.5
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 3.4e-22 108.2 74 67.6
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 4.4e-22 107.8 75 64.0
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 5.7e-22 107.5 72 66.7
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 1.7e-21 105.9 76 60.5
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 6.3e-21 104.0 60 78.3
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 6.3e-21 104.0 60 78.3
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 5.4e-20 100.9 62 72.6
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 7.0e-20 100.5 60 75.0
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 2.0e-19 99.0 91 51.6
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.0e-19 99.0 81 56.8
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 2.9e-18 95.1 59 71.2
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 1.1e-17 93.2 54 68.5
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 4.2e-17 91.3 53 73.6
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 7.2e-17 90.5 62 74.2
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 9.5e-17 90.1 87 52.9
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 9.5e-17 90.1 65 56.9
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 4.7e-16 87.8 57 61.4
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 1.4e-15 86.3 83 53.0
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 1.4e-15 86.3 83 53.0
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 6.8e-15 84.0 82 52.4
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.0e-14 82.4 43 81.4
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 3.4e-14 81.6 49 71.4
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.8e-13 78.6 42 81.0
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 3.7e-13 78.2 47 72.3
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 4.3e-09 64.7 65 44.6
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 9.5e-09 63.5 42 57.1
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 9.5e-09 63.5 41 68.3
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 5.2e-07 57.8 28 82.1
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 1.2e-06 56.6 28 82.1


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