Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 7.8e-48 193.4 90 100.0
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 9.8e-43 176.4 89 91.0
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 1.6e-37 159.1 86 83.7
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 8.9e-28 126.7 81 67.9
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-25 119.0 81 66.7
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 3.2e-25 118.2 84 60.7
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 4.1e-25 117.9 81 63.0
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 5.4e-25 117.5 81 61.7
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 5.4e-25 117.5 81 63.0
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 1.2e-24 116.3 84 59.5
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 1.6e-24 115.9 82 62.2
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 3.5e-24 114.8 89 58.4
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 6.0e-24 114.0 81 63.0
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-23 112.8 81 63.0
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 2.3e-23 112.1 81 59.3
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 5.1e-23 110.9 81 60.5
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 4.3e-22 107.8 82 57.3
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 7.3e-22 107.1 81 54.3
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.2e-21 106.3 81 60.5
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.6e-21 104.8 82 59.8
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 3.6e-21 104.8 80 60.0
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 6.2e-21 104.0 81 55.6
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 8.1e-21 103.6 83 53.0
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-20 103.2 82 58.5
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-20 103.2 82 58.5
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 4.0e-20 101.3 81 55.6
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 4.0e-20 101.3 82 57.3
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-19 99.8 82 57.3
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-19 99.8 82 56.1
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-19 99.4 64 68.8
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-19 99.0 83 55.4
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-19 98.6 81 56.8
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-19 98.6 83 54.2
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-19 98.6 83 54.2
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 3.4e-19 98.2 81 54.3
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-19 97.8 83 54.2
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 5.8e-19 97.4 83 55.4
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 1.3e-18 96.3 80 53.8
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 1.3e-18 96.3 80 53.8
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 1.3e-18 96.3 80 53.8
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 1.3e-18 96.3 80 53.8
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 1.7e-18 95.9 77 58.4
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.7e-18 95.9 82 54.9
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-18 94.7 83 53.0
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-18 94.7 80 58.8
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-18 94.7 83 53.0
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 3.8e-18 94.7 83 54.2
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 6.4e-18 94.0 71 57.7
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 1.1e-17 93.2 80 52.5
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 1.4e-17 92.8 80 51.2
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-17 92.8 80 57.5
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-17 92.8 80 57.5
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-17 92.8 80 57.5
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 1.9e-17 92.4 75 60.0
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 1.9e-17 92.4 75 60.0
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-17 92.4 80 57.5
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-17 92.4 63 61.9
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 2.4e-17 92.0 65 63.1
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-17 92.0 80 56.2
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-17 90.9 80 56.2
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 7.1e-17 90.5 80 56.2
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 9.2e-17 90.1 81 51.9
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 1.2e-16 89.7 89 44.9
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.2e-16 89.7 73 58.9
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-16 89.7 81 50.6
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-16 89.7 83 49.4
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-16 89.4 78 57.7
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 4.6e-16 87.8 76 50.0
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 6.0e-16 87.4 83 49.4
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 7.8e-16 87.0 64 64.1
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-16 87.0 83 50.6
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-15 86.7 77 58.4
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.3e-15 86.3 76 50.0
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 1.3e-15 86.3 77 48.1
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 2.3e-15 85.5 76 50.0
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-15 85.5 83 48.2
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 5.1e-15 84.3 83 48.2
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-14 83.2 81 45.7
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-14 82.8 84 50.0
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-14 82.4 83 48.2
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-14 82.4 80 53.8
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-14 82.4 84 45.2
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.9e-14 82.4 80 51.2
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.3e-14 81.6 84 45.2
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 3.3e-14 81.6 81 45.7
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 4.3e-14 81.3 83 45.8
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 4.3e-14 81.3 77 51.9
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 5.6e-14 80.9 68 57.4
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 5.6e-14 80.9 84 45.2
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 9.6e-14 80.1 82 46.3
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 1.2e-13 79.7 57 61.4
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-13 79.3 81 42.0
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 2.1e-13 79.0 83 47.0
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 2.1e-13 79.0 56 62.5
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-13 79.0 82 45.1
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-13 79.0 81 44.4
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 2.8e-13 78.6 81 46.9
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 3.6e-13 78.2 66 51.5
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-13 78.2 84 47.6
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-13 78.2 81 44.4
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 4.7e-13 77.8 75 53.3
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 6.2e-13 77.4 75 49.3
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 6.2e-13 77.4 83 44.6
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 8.1e-13 77.0 64 56.2
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-12 75.9 83 45.8
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 2.4e-12 75.5 69 52.2
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-12 75.5 85 43.5
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-12 75.5 83 45.8
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 3.1e-12 75.1 62 54.8
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 9.0e-12 73.6 45 64.4
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.5e-11 72.8 83 41.0
AUR62018245 Chenopodium quinoa HOM05D002760 ORTHO05D003169 2.6e-11 72.0 64 48.4
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-11 72.0 75 46.7
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 1.7e-10 69.3 76 39.5
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 3.8e-10 68.2 70 48.6
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 4.9e-10 67.8 68 47.1
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 4.9e-10 67.8 69 47.8
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 6.4e-10 67.4 44 63.6
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-09 66.2 86 43.0
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-09 65.9 79 45.6
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 4.6e-08 61.2 88 38.6
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 6.0e-08 60.8 70 42.9
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 2.5e-06 55.5 66 42.4
Oeu025447.1 Olea europaea HOM05D001338 ORTHO05D001239 5.6e-06 54.3 59 47.5
Medtr7g063340 Medicago truncatula HOM05D001338 ORTHO05D001239 7.3e-06 53.9 47 51.1
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 7.3e-06 53.9 34 61.8


User provided reference genes

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