Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0307471 Rosa chinensis HOM05D039450 ORTHO05D000169 1.6e-32 142.1 69 100.0
RcHm_v2.0_Chr6g0307641 Rosa chinensis HOM05D039450 ORTHO05D000169 1.6e-32 142.1 69 100.0
RcHm_v2.0_Chr1g0328291 Rosa chinensis HOM05D039450 ORTHO05D000169 2.5e-30 134.8 69 92.8
RcHm_v2.0_Chr7g0241461 Rosa chinensis HOM05D000697 ORTHO05D000169 1.4e-28 129.0 70 92.9
FvH4_5g39200 Fragaria vesca HOM05D000697 ORTHO05D000169 1.5e-27 125.6 69 85.5
FAN18G2971 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.5e-27 125.6 69 85.5
FAN08G3656 Fragaria x ananassa HOM05D000697 ORTHO05D000169 2.9e-26 121.3 69 84.1
FAN13G0960 Fragaria x ananassa HOM05D000697 ORTHO05D000169 3.2e-25 117.9 70 82.9
FAN04G0941 Fragaria x ananassa HOM05D000697 ORTHO05D000169 3.9e-23 110.9 69 81.2
MD03G1295200 Malus domestica HOM05D000697 ORTHO05D000169 4.6e-08 60.8 65 53.8
HPP92_013525 Vanilla planifolia HOM05D000697 ORTHO05D000169 2.3e-07 58.5 65 53.8
Prupe.8G267100 Prunus persica HOM05D000697 ORTHO05D000169 8.7e-07 56.6 65 53.8
CANSAT25G0922 Cannabis sativa HOM05D000697 ORTHO05D000169 3.3e-06 54.7 66 50.0
Ca_09210_v3 Cicer arietinum L. HOM05D000697 ORTHO05D000169 4.3e-06 54.3 65 49.2
Hma1.2p1_0212F.1_g089940 Hydrangea macrophylla HOM05D000697 ORTHO05D000169 4.3e-06 54.3 64 53.1
arahy.Tifrunner.gnm1.ann1.6JGL55 Arachis hypogaea HOM05D000697 ORTHO05D000169 9.6e-06 53.1 65 49.2
MD11G1314100 Malus domestica HOM05D000697 ORTHO05D000169 9.6e-06 53.1 65 52.3


User provided reference genes

Program Settings