Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0307111 Rosa chinensis HOM05D016041 ORTHO05D012248 4.9e-45 184.1 93 100.0
RcHm_v2.0_Chr7g0243261 Rosa chinensis HOM05D016041 ORTHO05D012248 8.0e-40 166.8 91 93.4
RcHm_v2.0_Chr1g0341921 Rosa chinensis HOM05D016041 ORTHO05D012248 3.5e-19 98.2 71 70.4
RcHm_v2.0_Chr4g0410851 Rosa chinensis HOM05D016041 ORTHO05D012248 1.3e-13 79.7 50 76.0
Oeu059320.1 Olea europaea HOM05D016041 ORTHO05D012248 1.9e-12 75.9 68 60.3
SHI19582 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-11 72.8 82 54.9
SHI06465 Sapria himalayana HOM05D016041 ORTHO05D012248 2.7e-11 72.0 83 53.0
VMungo0251G0498 Vigna mungo HOM05D004165 ORTHO05D005063 6.0e-11 70.9 64 62.5
TPR.G3084 Trifolium pratense HOM05D002002 ORTHO05D012248 5.1e-10 67.8 60 61.7
TAR192G0003 Trochodendron aralioides HOM05D016041 ORTHO05D012248 2.4e-07 58.9 83 44.6
Medtr8g099580 Medicago truncatula HOM05D000147 ORTHO05D004093 9.0e-07 57.0 46 60.9
QL07p032350 Quercus lobata HOM05D000234 ORTHO05D000335 5.8e-06 54.3 65 50.8


User provided reference genes

Program Settings