Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0306771 Rosa chinensis HOM05D026264 ORTHO05D029669 2.2e-70 268.9 139 100.0
FvH4_2g35170 Fragaria vesca HOM05D026264 ORTHO05D029669 2.9e-49 198.7 136 76.5
FAN15G3731 Fragaria x ananassa HOM05D026264 ORTHO05D029669 7.3e-45 184.1 135 75.6
FAN27G2277 Fragaria x ananassa HOM05D000805 ORTHO05D000624 5.6e-29 131.3 128 64.1
FAN20G1852 Fragaria x ananassa HOM05D026264 ORTHO05D029669 6.4e-25 117.9 136 52.9
FvH4_2g35151 Fragaria vesca HOM05D000805 ORTHO05D000624 1.5e-10 70.1 97 50.5
FAN20G2644 Fragaria x ananassa HOM05D000805 ORTHO05D000624 1.5e-10 70.1 97 50.5
PSO063G5652 Papaver somniferum HOM05D000805 ORTHO05D000624 3.4e-10 68.9 101 43.6
PSO832G3184 Papaver somniferum HOM05D000805 ORTHO05D000624 1.3e-09 67.0 81 51.9
RcHm_v2.0_Chr6g0306781 Rosa chinensis HOM05D000805 ORTHO05D000624 1.3e-09 67.0 92 51.1
Prupe.1G443700 Prunus persica HOM05D000805 ORTHO05D000624 2.2e-09 66.2 79 53.2
Cfa013392 Carpinus fangiana HOM05D000805 ORTHO05D000624 3.8e-09 65.5 81 51.9
CiPaw.07G201600 Carya illinoinensis HOM05D000805 ORTHO05D000624 3.8e-09 65.5 103 45.6
FAN20G2238 Fragaria x ananassa HOM05D000805 ORTHO05D000624 4.9e-09 65.1 101 45.5
Gohir.A07G022188 Gossypium hirsutum HOM05D000805 ORTHO05D000624 4.9e-09 65.1 83 49.4
Thecc.09G049000 Theobroma cacao HOM05D000805 ORTHO05D000624 4.9e-09 65.1 79 51.9
Gohir.D06G089800 Gossypium hirsutum HOM05D000805 ORTHO05D000624 6.4e-09 64.7 91 47.3
Gorai.010G103700 Gossypium raimondii HOM05D000805 ORTHO05D000624 6.4e-09 64.7 91 47.3
MD08G1109100 Malus domestica HOM05D000805 ORTHO05D000624 6.4e-09 64.7 95 45.3
Haze_21934 Corylus avellana HOM05D000805 ORTHO05D000624 8.4e-09 64.3 81 50.6
Gohir.A06G090900 Gossypium hirsutum HOM05D000805 ORTHO05D000624 8.4e-09 64.3 91 47.3
COL.COLO4_21008 Corchorus olitorius HOM05D000805 ORTHO05D000624 1.1e-08 63.9 99 43.4
Dinv23401 Davidia involucrata HOM05D000805 ORTHO05D000624 1.1e-08 63.9 81 50.6
FvH4_2g35160 Fragaria vesca HOM05D000805 ORTHO05D000624 1.1e-08 63.9 89 48.3
TAR626G0937 Trochodendron aralioides HOM05D000805 ORTHO05D000624 1.1e-08 63.9 111 43.2
TAR626G1162 Trochodendron aralioides HOM05D000805 ORTHO05D000624 1.1e-08 63.9 111 43.2
Lalb_Chr23g0269771 Lupinus albus HOM05D000805 ORTHO05D000624 1.4e-08 63.5 81 49.4
Glyma.06G078700 Glycine max HOM05D000805 ORTHO05D000624 1.9e-08 63.2 89 44.9
EL10Ac2g03961 Beta vulgaris HOM05D000805 ORTHO05D000624 2.4e-08 62.8 81 48.1
Rhsim11G0049200 Rhododendron simsii HOM05D000805 ORTHO05D000624 2.4e-08 62.8 80 47.5
Glyma.04G077600 Glycine max HOM05D000805 ORTHO05D000624 4.2e-08 62.0 79 49.4
AUR62040213 Chenopodium quinoa HOM05D000805 ORTHO05D000624 5.4e-08 61.6 81 49.4
Lj1g0002121 Lotus japonicus HOM05D000805 ORTHO05D000624 5.4e-08 61.6 81 49.4
MBI04_g06987_MAGBIO Magnolia biondii HOM05D000805 ORTHO05D000624 5.4e-08 61.6 80 50.0
DCAR_003073 Daucus carota HOM05D000805 ORTHO05D000624 7.1e-08 61.2 81 50.6
A04p20090 Brassica napus HOM05D000805 ORTHO05D000624 9.3e-08 60.8 107 39.3
BraA04t17591Z Brassica rapa HOM05D000805 ORTHO05D000624 9.3e-08 60.8 107 39.3
RcHm_v2.0_Chr6g0306791 Rosa chinensis HOM05D000805 ORTHO05D000624 9.3e-08 60.8 104 37.5
THA.LOC104818593 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 9.3e-08 60.8 88 42.0
TPR.G12313 Trifolium pratense HOM05D000805 ORTHO05D000624 9.3e-08 60.8 79 49.4
BcaB06g29636 Brassica carinata HOM05D000805 ORTHO05D000624 1.2e-07 60.5 107 39.3
BolC4t27103H Brassica oleracea HOM05D000805 ORTHO05D000624 1.2e-07 60.5 107 39.3
Aa31LG5G9790 Aethionema arabicum HOM05D000805 ORTHO05D000624 1.6e-07 60.1 88 45.5
Ca_15641_v3 Cicer arietinum L. HOM05D000805 ORTHO05D000624 1.6e-07 60.1 79 48.1
Ciclev10009815m.g Citrus clementina HOM05D000805 ORTHO05D000624 2.1e-07 59.7 80 52.5
Medtr3g109190 Medicago truncatula HOM05D000805 ORTHO05D000624 2.1e-07 59.7 79 46.8
Nn8g39009 Nelumbo nucifera HOM05D000805 ORTHO05D000624 2.1e-07 59.7 81 48.1
Aqoxy7G01357 Aquilegia oxysepala HOM05D000805 ORTHO05D000624 2.7e-07 59.3 120 40.0
FvH4_3g15571 Fragaria vesca HOM05D000805 ORTHO05D000624 3.5e-07 58.9 106 40.6
Eucgr.C00618 Eucalyptus grandis HOM05D000805 ORTHO05D000624 4.6e-07 58.5 80 50.0
Gohir.D05G046400 Gossypium hirsutum HOM05D000805 ORTHO05D000624 4.6e-07 58.5 92 43.5
Gorai.009G047800 Gossypium raimondii HOM05D000805 ORTHO05D000624 6.0e-07 58.2 81 46.9
TAR383G0309 Trochodendron aralioides HOM05D000805 ORTHO05D000624 6.0e-07 58.2 92 40.2
arahy.Tifrunner.gnm1.ann1.YSQ5WX Arachis hypogaea HOM05D000805 ORTHO05D000624 7.9e-07 57.8 92 40.2
Manes.16G076500 Manihot esculenta HOM05D000805 ORTHO05D000624 7.9e-07 57.8 81 50.6
Duzib187G0010 Durio zibethinus HOM05D000805 ORTHO05D000624 1.0e-06 57.4 79 48.1
Gohir.D07G024050 Gossypium hirsutum HOM05D000805 ORTHO05D000624 1.0e-06 57.4 83 44.6
Gorai.001G024800 Gossypium raimondii HOM05D000805 ORTHO05D000624 1.0e-06 57.4 83 44.6
Lalb_Chr08g0242891 Lupinus albus HOM05D000805 ORTHO05D000624 1.0e-06 57.4 81 46.9
Carub.0004s0571 Capsella rubella HOM05D000805 ORTHO05D000624 1.7e-06 56.6 88 43.2
Sc06g0000870 Simmondsia chinensis HOM05D000805 ORTHO05D000624 1.7e-06 56.6 78 46.2
arahy.Tifrunner.gnm1.ann1.N1YYK3 Arachis hypogaea HOM05D000805 ORTHO05D000624 2.3e-06 56.2 92 39.1
Potri.006G234900 Populus trichocarpa HOM05D000805 ORTHO05D000624 3.0e-06 55.8 82 47.6
CSS0007173 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 5.1e-06 55.1 97 39.2
Lj8P565T8 Lonicera japonica HOM05D000805 ORTHO05D000624 5.1e-06 55.1 103 39.8
Oeu038822.1 Olea europaea HOM05D000805 ORTHO05D000624 5.1e-06 55.1 57 56.1
TWI63G0923 Tripterygium wilfordii HOM05D000805 ORTHO05D000624 5.1e-06 55.1 82 47.6
AT2G25890 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 8.7e-06 54.3 88 42.0
CSS0028786 Camellia sinensis var. sinensis HOM05D000805 ORTHO05D000624 8.7e-06 54.3 56 51.8


User provided reference genes

Program Settings