Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 2.1e-172 609.0 323 100.0
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.9e-157 559.3 323 91.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 9.6e-157 557.0 323 91.3
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.1e-156 555.8 323 91.0
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 3.3e-141 505.4 325 84.6
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 1.1e-131 473.8 325 79.7
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.2e-127 460.3 330 76.7
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.0e-126 457.2 330 76.4
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 5.1e-126 454.9 325 75.1
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.1e-125 453.8 326 76.4
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 3.3e-125 452.2 328 76.2
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 2.2e-124 449.5 326 74.5
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 3.1e-123 445.7 324 74.4
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 1.7e-121 439.9 325 72.6
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 2.9e-121 439.1 325 72.0
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 6.5e-121 438.0 328 72.6
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 6.5e-121 438.0 326 73.9
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.6e-119 433.3 330 73.3
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 2.7e-119 432.6 292 77.1
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 6.1e-119 431.4 326 73.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 4.4e-117 425.2 326 71.2
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 3.7e-116 422.2 331 70.7
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 4.8e-116 421.8 322 72.7
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.4e-115 420.2 347 68.0
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.4e-115 419.5 325 69.2
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 4.1e-115 418.7 321 71.3
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 5.3e-115 418.3 324 71.9
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 9.1e-115 417.5 332 70.2
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 9.1e-115 417.5 328 71.0
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.2e-114 417.2 326 69.6
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.5e-114 416.8 329 69.3
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.0e-114 416.4 324 71.3
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.9e-113 412.5 311 71.4
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 8.5e-113 411.0 335 68.7
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.1e-112 410.6 330 69.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.5e-112 409.5 313 71.9
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.5e-112 409.5 331 68.9
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 3.2e-112 409.1 323 69.3
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 9.4e-112 407.5 342 66.1
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.3e-110 402.9 331 68.6
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.3e-110 402.9 319 69.3
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 3.0e-110 402.5 250 86.0
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 5.2e-110 401.7 327 67.9
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 5.2e-110 401.7 316 70.9
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 6.7e-110 401.4 291 75.9
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 6.7e-110 401.4 321 67.6
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 8.8e-110 401.0 313 71.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 8.8e-110 401.0 323 68.1
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.1e-109 400.6 330 69.1
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.1e-109 400.6 329 68.7
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.1e-109 400.6 323 69.0
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.1e-109 400.6 286 74.1
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 2.6e-109 399.4 321 68.2
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 3.3e-109 399.1 322 66.8
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.4e-109 397.9 326 69.6
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 7.4e-109 397.9 249 81.5
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 9.7e-109 397.5 250 82.8
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.7e-108 396.7 327 67.0
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 2.2e-108 396.4 327 68.2
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.2e-108 396.4 323 67.2
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.2e-108 396.4 323 66.9
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 3.7e-108 395.6 259 79.5
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.4e-107 393.7 256 80.1
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.8e-107 393.3 323 68.4
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 5.3e-107 391.7 320 69.1
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.6e-106 390.2 294 71.4
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.6e-106 390.2 324 66.4
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.0e-106 389.8 291 73.2
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.0e-106 389.8 259 78.0
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 5.9e-106 388.3 274 74.5
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.7e-105 386.7 322 65.5
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.8e-105 385.6 325 66.2
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.1e-104 384.0 291 71.8
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 1.5e-104 383.6 327 66.7
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.5e-104 382.9 285 72.6
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 7.2e-104 381.3 329 67.5
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.6e-103 380.2 365 61.1
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 2.1e-103 379.8 325 65.8
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 2.1e-103 379.8 285 71.2
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 8.0e-103 377.9 236 82.6
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.0e-102 377.5 321 64.8
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.0e-102 375.6 343 64.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 6.7e-102 374.8 322 63.7
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 3.3e-101 372.5 327 63.3
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.1e-99 367.5 238 78.2
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.8e-99 366.7 295 66.4
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.0e-98 363.2 353 61.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 2.5e-96 356.3 326 60.7
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.6e-93 346.3 326 60.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.2e-90 337.4 255 73.3
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.3e-89 333.2 221 73.8
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.1e-88 330.9 235 71.5
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.5e-88 330.5 264 69.3
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.0e-86 322.4 323 59.1
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 5.7e-85 318.5 220 77.7
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 7.8e-82 308.1 261 67.4
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 7.3e-80 301.6 216 67.6
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 4.7e-79 298.9 223 70.0
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 4.4e-77 292.4 238 68.1
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 6.6e-73 278.5 190 76.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 8.6e-73 278.1 260 55.0
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.9e-67 260.4 253 51.8
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 2.7e-66 256.5 328 46.0
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.4e-61 239.2 251 49.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 7.5e-61 238.4 283 46.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.1e-56 224.6 259 45.9
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.3e-56 221.9 249 49.0
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.2e-55 221.1 129 86.8
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.8e-54 217.2 253 45.8
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.1e-48 198.0 265 40.8
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 9.9e-45 184.9 163 68.1
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.4e-43 180.3 246 43.9
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 7.3e-40 168.7 123 70.7
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.1e-39 167.2 246 37.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 6.0e-26 122.5 244 31.6
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.1e-23 114.0 321 35.2
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.9e-19 100.9 254 30.3
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 9.7e-08 62.0 146 37.0
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.4e-06 58.2 32 90.6
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 6.9e-06 55.8 52 57.7


User provided reference genes

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