Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 2.2e-183 645.6 348 100.0
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.2e-120 437.2 353 70.0
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.1e-118 430.6 353 70.3
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 4.2e-118 428.7 353 70.3
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.6e-117 426.8 353 69.7
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 3.9e-23 113.2 351 35.3
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.3e-18 98.2 219 37.0
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 2.1e-16 90.9 340 32.4
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 4.7e-16 89.7 340 32.4
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 1.0e-15 88.6 358 30.2
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 1.8e-15 87.8 170 37.1
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 3.0e-15 87.0 192 38.5
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.0e-15 86.7 266 29.7
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.2e-14 85.1 339 31.6
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 1.7e-13 81.3 164 39.0
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.3e-12 76.3 199 34.2
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 9.1e-12 75.5 184 35.3
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 2.0e-11 74.3 191 34.6
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 2.7e-11 73.9 331 28.7
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 3.5e-11 73.6 203 31.0
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 4.5e-11 73.2 338 30.2
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 7.7e-11 72.4 332 28.3
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.7e-10 71.2 215 33.0
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.2e-10 70.9 185 34.1
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 6.5e-10 69.3 176 36.4
MD15G1011900 Malus domestica HOM05D015458 ORTHO05D008337 6.5e-10 69.3 317 29.0
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.1e-09 68.6 235 30.6
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 1.5e-09 68.2 224 29.9
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 1.5e-09 68.2 184 32.6
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 1.9e-09 67.8 172 36.0
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 1.9e-09 67.8 178 33.7
GSVIVG01009892001 Vitis vinifera HOM05D000594 ORTHO05D002521 9.4e-09 65.5 142 35.9
GSVIVG01009911001 Vitis vinifera HOM05D007760 ORTHO05D008337 1.2e-08 65.1 141 36.2
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.6e-08 64.7 189 32.3
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 1.6e-08 64.7 161 32.9
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.6e-08 64.7 206 35.4
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 2.1e-08 64.3 330 29.4
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 4.7e-08 63.2 180 31.7
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 6.1e-08 62.8 200 30.0
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 6.1e-08 62.8 107 44.9
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.0e-07 62.0 227 29.5
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 1.0e-07 62.0 331 30.8
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 1.8e-07 61.2 164 33.5
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 3.0e-07 60.5 272 29.0
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 4.0e-07 60.1 236 28.4
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 4.0e-07 60.1 202 32.2
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 6.8e-07 59.3 329 28.9
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 8.8e-07 58.9 165 27.9
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.2e-06 58.5 244 26.6
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 1.5e-06 58.2 91 46.2
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.5e-06 58.2 201 30.3
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.5e-06 58.2 128 37.5
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 1.5e-06 58.2 86 45.3
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 2.0e-06 57.8 166 30.7
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 2.0e-06 57.8 180 29.4
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 2.6e-06 57.4 199 27.1
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 2.6e-06 57.4 138 37.0
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 3.4e-06 57.0 169 35.5
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 4.4e-06 56.6 163 28.8
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 5.7e-06 56.2 77 45.5
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 7.5e-06 55.8 235 28.5
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 9.8e-06 55.5 330 26.7


User provided reference genes

Program Settings