Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 1.3e-79 299.7 147 100.0
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 1.7e-52 209.5 159 74.8
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 9.4e-51 203.8 159 72.3
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 1.0e-49 200.3 160 73.1
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 5.1e-49 198.0 161 70.2
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 5.7e-24 114.8 160 46.2
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 1.7e-23 113.2 143 46.9
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 2.8e-23 112.5 158 46.2
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 4.8e-23 111.7 158 49.4
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 1.8e-22 109.8 143 46.2
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 3.1e-22 109.0 155 47.1
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 4.5e-21 105.1 141 46.1
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 2.9e-20 102.4 150 46.0
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 2.9e-20 102.4 145 42.8
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 3.8e-20 102.1 141 45.4
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 5.0e-20 101.7 143 45.5
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 8.6e-20 100.9 143 43.4
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 8.6e-20 100.9 156 42.3
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.6e-20 100.9 143 44.1
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.5e-19 98.2 143 43.4
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 5.5e-19 98.2 143 43.4
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 5.5e-19 98.2 142 44.4
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 7.2e-19 97.8 158 44.3
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 7.2e-19 97.8 146 45.2
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 7.2e-19 97.8 151 42.4
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 9.5e-19 97.4 141 41.8
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 9.5e-19 97.4 153 43.1
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 9.5e-19 97.4 157 40.1
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 9.5e-19 97.4 141 43.3
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 1.2e-18 97.1 140 45.0
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 1.6e-18 96.7 146 46.6
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 1.6e-18 96.7 145 44.1
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 1.6e-18 96.7 141 39.0
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 2.1e-18 96.3 141 44.0
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 2.8e-18 95.9 146 39.7
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.8e-18 95.9 142 43.0
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.6e-18 95.5 141 43.3
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 4.7e-18 95.1 157 40.8
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 6.1e-18 94.7 153 43.1
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.0e-18 94.4 142 42.3
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 8.0e-18 94.4 145 43.4
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 1.4e-17 93.6 146 40.4
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.3e-17 92.8 157 43.3
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 3.0e-17 92.4 152 39.5
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 3.0e-17 92.4 158 40.5
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 3.0e-17 92.4 143 42.7
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 3.0e-17 92.4 145 42.1
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 5.2e-17 91.7 151 40.4
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 8.9e-17 90.9 158 40.5
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 8.9e-17 90.9 147 40.1
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 1.2e-16 90.5 139 41.7
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 1.5e-16 90.1 141 42.6
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 1.5e-16 90.1 160 39.4
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 2.0e-16 89.7 145 42.1
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 2.0e-16 89.7 141 39.0
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 5.7e-16 88.2 150 40.7
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 5.7e-16 88.2 147 40.8
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 5.7e-16 88.2 125 42.4
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 7.5e-16 87.8 149 41.6
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 9.8e-16 87.4 147 39.5
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 9.8e-16 87.4 121 45.5
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 2.2e-15 86.3 139 41.7
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 2.2e-15 86.3 146 43.8
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 2.8e-15 85.9 141 41.8
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.8e-15 85.9 144 41.7
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 3.7e-15 85.5 141 39.7
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 4.9e-15 85.1 141 38.3
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.3e-15 84.7 146 41.1
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 8.3e-15 84.3 141 39.0
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 8.3e-15 84.3 141 39.0
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.8e-14 83.2 160 41.9
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.8e-14 83.2 146 40.4
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 3.1e-14 82.4 136 43.4
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 3.1e-14 82.4 156 39.1
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 7.0e-14 81.3 146 41.1
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 9.2e-14 80.9 149 38.9
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 1.6e-13 80.1 141 40.4
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 1.6e-13 80.1 122 41.0
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.6e-13 80.1 141 40.4
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 2.0e-13 79.7 142 38.7
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.7e-13 79.3 145 40.7
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 2.7e-13 79.3 145 40.7
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 2.7e-13 79.3 142 37.3
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 4.5e-13 78.6 143 41.3
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 5.9e-13 78.2 146 40.4
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 5.9e-13 78.2 126 42.1
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 7.8e-13 77.8 142 38.7
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.3e-12 77.0 140 39.3
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 1.3e-12 77.0 143 35.7
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 1.3e-12 77.0 141 39.0
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.7e-12 76.6 147 38.8
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.7e-12 76.6 130 42.3
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 1.7e-12 76.6 148 36.5
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.3e-12 76.3 138 34.1
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 3.8e-12 75.5 140 36.4
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 6.6e-12 74.7 147 36.7
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 6.6e-12 74.7 148 35.8
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 8.6e-12 74.3 123 39.0
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 8.6e-12 74.3 154 37.0
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.5e-11 73.6 122 36.1
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 1.9e-11 73.2 138 36.2
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 2.5e-11 72.8 138 37.7
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 2.5e-11 72.8 145 39.3
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 2.5e-11 72.8 147 34.7
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 4.3e-11 72.0 152 36.2
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 4.3e-11 72.0 143 39.2
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 4.3e-11 72.0 149 37.6
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 5.6e-11 71.6 147 33.3
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 7.3e-11 71.2 140 36.4
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 7.3e-11 71.2 146 36.3
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 9.5e-11 70.9 149 38.9
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 9.5e-11 70.9 147 35.4
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 9.5e-11 70.9 148 35.1
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 1.6e-10 70.1 137 37.2
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 1.6e-10 70.1 155 36.1
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 2.8e-10 69.3 152 34.9
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 2.8e-10 69.3 125 40.0
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 2.8e-10 69.3 138 35.5
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 3.6e-10 68.9 127 36.2
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.6e-10 68.9 155 36.1
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 3.6e-10 68.9 138 35.5
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 4.7e-10 68.6 138 31.9
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 4.7e-10 68.6 138 32.6
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 4.7e-10 68.6 147 32.0
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 4.7e-10 68.6 137 32.8
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 4.7e-10 68.6 165 36.4
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 8.0e-10 67.8 138 32.6
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 8.0e-10 67.8 138 32.6
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 1.0e-09 67.4 138 32.6
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 1.0e-09 67.4 138 32.6
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.0e-09 67.4 145 33.8
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.0e-09 67.4 125 40.8
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 1.4e-09 67.0 145 36.6
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.4e-09 67.0 140 35.7
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.8e-09 66.6 140 35.0
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.8e-09 66.6 141 36.2
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 3.1e-09 65.9 138 31.9
Actinidia30825 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.2e-08 63.9 96 46.9
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 2.0e-08 63.2 150 32.7
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 3.4e-08 62.4 124 35.5
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 7.5e-08 61.2 105 36.2
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 7.5e-08 61.2 105 36.2
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 9.8e-08 60.8 138 34.1
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.9e-07 59.3 139 30.2
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.7e-07 58.9 151 29.1
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.1e-06 57.4 147 30.6
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.1e-06 57.4 144 32.6
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.4e-06 56.2 154 26.6
Mapoly0152s0035 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.0e-06 54.7 149 28.9
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 7.0e-06 54.7 39 64.1


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