Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 0.0e+00 1461.0 737 100.0
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 0.0e+00 1194.1 737 83.3
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 0.0e+00 1190.6 737 82.9
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 0.0e+00 1183.3 737 82.4
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 0.0e+00 1174.5 737 82.1
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 4.2e-224 781.9 772 60.0
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 9.4e-184 647.9 922 48.4
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 1.4e-182 644.0 725 55.9
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 8.1e-119 432.2 808 40.2
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.2e-109 401.7 869 37.1
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.5e-104 384.0 802 39.3
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.5e-96 358.2 952 34.9
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 7.7e-93 345.9 902 34.3
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 6.9e-86 322.8 796 34.8
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 2.2e-84 317.8 884 33.7
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 9.7e-80 302.4 927 32.5
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.8e-79 300.8 852 32.3
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.8e-79 300.8 845 32.5
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 1.1e-78 298.9 813 33.7
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 7.0e-78 296.2 818 34.7
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 9.1e-78 295.8 818 34.6
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.0e-77 294.7 1006 30.6
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.7e-76 291.6 754 34.1
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 6.5e-76 289.7 740 34.6
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.9e-75 288.1 844 32.7
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 5.5e-75 286.6 787 34.2
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.1e-70 272.3 864 30.8
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 2.6e-69 267.7 836 31.1
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 5.9e-69 266.5 793 31.0
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 7.7e-69 266.2 811 31.8
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 5.5e-67 260.0 755 32.6
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.7e-66 257.7 1132 27.3
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 8.0e-66 256.1 801 32.2
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 2.0e-64 251.5 803 32.6
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 2.0e-64 251.5 822 31.8
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.7e-63 248.4 787 32.3
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 2.2e-63 248.1 818 31.1
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 6.3e-63 246.5 800 29.1
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 6.3e-63 246.5 729 33.5
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 2.0e-61 241.5 987 28.1
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.7e-61 241.1 810 30.5
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 8.5e-60 236.1 809 30.2
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.1e-59 235.7 799 31.8
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.5e-59 234.6 827 30.7
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.2e-59 234.2 801 31.7
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 4.2e-59 233.8 798 30.8
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 7.2e-59 233.0 790 30.9
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 7.2e-59 233.0 862 29.0
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 3.6e-58 230.7 826 30.9
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 4.7e-58 230.3 839 30.5
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.4e-57 228.8 821 29.0
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.0e-57 227.6 813 30.9
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 4.0e-57 227.3 735 32.2
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 6.3e-55 219.9 901 28.0
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.1e-54 219.2 867 29.4
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.4e-54 218.8 746 30.3
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 4.1e-54 217.2 684 32.0
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.2e-53 215.7 757 30.0
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 4.5e-53 213.8 707 30.6
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.3e-52 212.2 818 28.9
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 6.6e-52 209.9 785 30.2
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 8.6e-52 209.5 492 35.8
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.1e-51 209.1 892 27.5
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.1e-51 209.1 280 48.2
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 5.2e-49 200.3 798 28.3
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 5.7e-48 196.8 915 27.0
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 2.9e-47 194.5 487 33.7
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.8e-46 191.8 306 43.5
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 2.0e-45 188.3 521 33.0
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 5.9e-45 186.8 823 27.5
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 3.0e-44 184.5 1011 26.0
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 3.9e-44 184.1 769 28.9
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.5e-43 182.2 250 44.4
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.0e-41 174.1 205 52.7
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 8.9e-41 172.9 324 38.0
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 2.6e-40 171.4 226 48.7
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.7e-39 168.7 892 26.0
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 4.9e-39 167.2 688 28.8
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 6.4e-39 166.8 873 25.9
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 5.4e-38 163.7 770 27.1
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 2.0e-37 161.8 264 39.8
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 6.0e-37 160.2 251 40.6
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.0e-36 157.9 200 47.0
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.5e-35 155.6 767 26.5
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.9e-35 155.2 771 25.9
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 7.3e-35 153.3 789 26.6
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 4.0e-33 147.5 764 27.1
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 8.9e-33 146.4 829 25.3
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.5e-32 145.6 283 36.0
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.5e-32 145.6 291 37.1
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 2.0e-32 145.2 280 38.2
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 2.0e-32 145.2 280 38.2
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.9e-31 141.4 280 38.2
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.9e-31 141.4 280 38.2
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 2.9e-31 141.4 280 38.2
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 3.2e-30 137.9 318 35.8
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 1.0e-28 132.9 376 31.9
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 3.0e-28 131.3 254 36.2
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 3.9e-28 131.0 388 31.7
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.5e-27 129.0 255 36.5
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.7e-26 124.0 253 37.2
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.1e-25 122.9 290 34.5
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.1e-25 122.9 216 37.0
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.8e-25 122.1 264 34.8
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 2.3e-25 121.7 261 34.1
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 8.9e-25 119.8 868 23.2
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 2.0e-24 118.6 410 30.2
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 3.4e-24 117.9 202 41.6
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.2e-23 115.2 174 43.1
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.1e-22 112.8 254 34.6
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.4e-22 112.5 341 30.2
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.6e-21 109.0 814 24.4
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.1e-21 108.6 258 34.5
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.1e-21 108.6 815 24.7
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 5.6e-19 100.5 143 40.6
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.9e-14 85.5 245 32.2
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.8e-09 68.9 134 38.8
Gohir.A03G078400 Gossypium hirsutum HOM05D005945 ORTHO05D006749 3.4e-08 64.7 156 37.8
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 4.4e-08 64.3 254 30.7
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 7.6e-08 63.5 76 43.4
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 7.6e-08 63.5 526 24.5
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 1.7e-07 62.4 87 46.0
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 2.2e-07 62.0 183 29.0
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 4.9e-07 60.8 160 28.8


User provided reference genes

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