Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 1.4e-48 196.1 105 100.0
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 2.8e-41 171.8 105 88.6
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 5.3e-40 167.5 105 86.7
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 2.2e-17 92.4 106 53.8
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 2.2e-14 82.4 85 54.1
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 1.6e-12 76.3 81 53.1
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.7e-12 74.7 78 50.0
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.7e-12 74.7 78 50.0
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 6.1e-12 74.3 80 53.8
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 1.8e-11 72.8 67 61.2
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 3.0e-11 72.0 79 50.6
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 4.0e-11 71.6 78 51.3
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 5.2e-11 71.2 109 43.1
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 5.2e-11 71.2 99 47.5
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 6.8e-11 70.9 68 54.4
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 1.5e-10 69.7 110 43.6
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 3.4e-10 68.6 102 45.1
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 4.4e-10 68.2 67 56.7
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 5.7e-10 67.8 103 46.6
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 5.7e-10 67.8 71 53.5
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 7.5e-10 67.4 86 45.3
Potri.014G038500 Populus trichocarpa HOM05D008210 ORTHO05D010078 9.8e-10 67.0 100 43.0
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 1.3e-09 66.6 75 53.3
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 2.2e-09 65.9 90 42.2
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 3.7e-09 65.1 87 48.3
CiPaw.15G068700 Carya illinoinensis HOM05D008210 ORTHO05D010078 4.9e-09 64.7 104 41.3
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 4.9e-09 64.7 107 38.3
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 6.3e-09 64.3 84 42.9
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 8.3e-09 63.9 106 45.3
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.1e-08 63.5 88 42.0
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 1.1e-08 63.5 101 43.6
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 1.1e-08 63.5 103 39.8
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.8e-08 62.8 111 38.7
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 1.8e-08 62.8 109 40.4
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 2.4e-08 62.4 53 56.6
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 3.1e-08 62.0 106 44.3
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 3.1e-08 62.0 108 37.0
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 7.0e-08 60.8 63 50.8
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.2e-07 60.1 107 37.4
SalBow8G0954 Salvia bowleyana HOM05D008210 ORTHO05D010078 1.2e-07 60.1 65 55.4
MELO3C010908.2 Cucumis melo HOM05D022138 ORTHO05D010078 2.0e-07 59.3 56 53.6
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 2.0e-07 59.3 80 46.2
Cc10_g03600 Coffea canephora HOM05D008210 ORTHO05D010078 2.7e-07 58.9 82 46.3
Carub.0001s3639 Capsella rubella HOM05D015684 ORTHO05D010078 3.5e-07 58.5 67 49.3
ECA247G0280 Erigeron canadensis HOM05D008210 ORTHO05D010078 3.5e-07 58.5 84 44.0
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 3.5e-07 58.5 110 38.2
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 7.7e-07 57.4 105 41.9
Lalb_Chr08g0245741 Lupinus albus HOM05D008210 ORTHO05D010078 7.7e-07 57.4 116 37.9
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 7.7e-07 57.4 81 42.0
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.0e-06 57.0 45 66.7
Ca_15536_v3 Cicer arietinum L. HOM05D008210 ORTHO05D010078 1.3e-06 56.6 76 46.1
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 1.3e-06 56.6 108 38.9
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 2.9e-06 55.5 111 41.4
Nn4g22836 Nelumbo nucifera HOM05D008210 ORTHO05D010078 5.0e-06 54.7 63 47.6
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 6.6e-06 54.3 73 41.1
Migut.N02682 Erythranthe guttata HOM05D008210 ORTHO05D010078 8.6e-06 53.9 44 59.1
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 8.6e-06 53.9 86 39.5


User provided reference genes

Program Settings