Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 7.7e-115 417.2 209 100.0
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.4e-100 369.0 209 90.4
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.6e-99 366.3 209 90.0
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 3.5e-99 365.2 209 90.0
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.5e-99 365.2 209 90.0
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 8.8e-95 350.5 209 85.2
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 4.5e-91 338.2 210 83.3
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 5.0e-90 334.7 209 81.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 4.2e-89 331.6 209 79.9
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.6e-88 329.7 209 80.4
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.6e-88 329.7 209 80.4
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.6e-88 329.7 209 79.9
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 2.1e-88 329.3 209 78.5
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 3.6e-88 328.6 209 79.4
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 4.7e-88 328.2 217 78.8
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 6.1e-88 327.8 176 87.5
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 8.0e-88 327.4 209 78.0
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.3e-87 325.9 211 80.6
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 3.0e-87 325.5 209 79.9
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 5.2e-87 324.7 210 79.5
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 6.8e-87 324.3 176 86.4
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.2e-86 323.6 209 77.5
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 3.4e-86 322.0 210 79.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 6.3e-85 317.8 209 77.5
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.4e-84 316.6 166 88.6
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.8e-84 316.2 213 74.6
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.4e-84 315.8 209 74.6
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.4e-84 315.8 172 87.8
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 5.4e-84 314.7 209 75.6
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 5.4e-84 314.7 215 74.9
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 7.0e-84 314.3 209 76.1
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 7.0e-84 314.3 171 85.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 9.1e-84 313.9 209 77.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 1.2e-83 313.5 191 77.5
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 1.2e-83 313.5 170 85.9
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.2e-83 313.5 197 77.7
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.6e-83 313.2 209 74.6
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.0e-83 312.8 209 76.6
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.0e-83 312.8 167 85.6
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 3.5e-83 312.0 209 76.1
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 5.9e-83 311.2 167 85.0
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 5.9e-83 311.2 167 85.0
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 5.9e-83 311.2 167 85.6
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.0e-82 310.5 166 84.9
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.0e-82 310.5 209 74.2
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.0e-82 310.5 209 75.1
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.3e-82 310.1 209 76.6
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 2.3e-82 309.3 199 76.9
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.9e-82 308.9 209 74.2
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 5.0e-82 308.1 166 84.9
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 5.0e-82 308.1 166 84.9
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 5.0e-82 308.1 166 84.9
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 5.0e-82 308.1 166 84.9
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 5.0e-82 308.1 166 84.9
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 5.0e-82 308.1 166 84.9
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 5.0e-82 308.1 209 74.2
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 6.6e-82 307.8 197 77.2
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.5e-81 306.6 183 81.4
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.5e-81 306.6 167 85.6
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.5e-81 305.8 209 74.2
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 3.3e-81 305.4 197 75.6
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 3.3e-81 305.4 209 73.2
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 4.2e-81 305.1 170 84.1
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 4.2e-81 305.1 211 74.4
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 9.5e-81 303.9 206 73.3
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.1e-80 302.8 209 73.7
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.8e-80 302.4 176 83.0
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.6e-80 302.0 209 72.7
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 6.1e-80 301.2 230 68.3
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 6.1e-80 301.2 220 71.4
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 6.1e-80 301.2 209 71.3
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.4e-79 300.1 199 72.4
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.4e-79 300.1 209 74.2
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 8.9e-79 297.4 180 78.9
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 4.4e-78 295.0 212 73.1
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 9.8e-78 293.9 170 81.8
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.3e-77 293.5 183 76.5
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.7e-77 293.1 211 73.0
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 5.4e-76 288.1 153 86.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 5.6e-73 278.1 169 77.5
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 1.2e-72 276.9 221 67.9
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 5.8e-70 268.1 164 77.4
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 6.4e-69 264.6 180 77.8
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 8.3e-69 264.2 182 74.2
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.4e-68 262.7 141 85.1
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 5.4e-68 261.5 140 88.6
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 7.0e-68 261.2 167 72.5
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 2.7e-67 259.2 137 86.1
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.6e-67 258.5 148 83.8
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.9e-65 253.1 184 71.2
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.6e-64 250.0 181 65.2
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.1e-63 245.7 157 74.5
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 4.0e-63 245.4 223 61.0
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.6e-59 233.4 163 66.9
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 3.3e-57 225.7 161 69.6
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.1e-55 220.7 152 69.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.1e-55 220.7 111 91.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.2e-55 218.4 211 54.5
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 4.7e-48 195.3 159 58.5
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 4.4e-46 188.7 194 57.2
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 6.4e-29 131.7 140 44.3
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.9e-17 93.6 165 37.6
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.9e-12 77.0 133 37.6
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.0e-10 71.2 37 81.1
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 2.0e-06 57.0 138 26.1
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 4.5e-06 55.8 132 31.1


User provided reference genes

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