Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0296991 Rosa chinensis HOM05D007743 ORTHO05D004645 6.8e-122 441.0 285 100.0
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.4e-79 299.7 281 59.4
FAN24G2509 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.4e-58 230.7 250 53.6
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 1.8e-53 213.8 277 52.0
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.0e-53 213.0 254 50.4
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.8e-51 205.7 290 45.5
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-50 203.8 219 53.0
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-50 203.8 219 53.0
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-50 203.8 219 53.0
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-50 203.8 219 53.0
FAN09G4280 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.4e-50 203.4 216 53.7
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.3e-50 202.2 219 52.5
FAN18G2940 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.3e-50 202.2 219 52.5
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 4.6e-46 189.1 143 67.8
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 1.8e-45 187.2 115 80.0
FAN09G0506 Fragaria x ananassa HOM05D007743 ORTHO05D004645 8.2e-43 178.3 283 43.5
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 3.8e-40 169.5 192 50.0
FAN18G0507 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.4e-36 155.2 183 49.2
FAN19G3162 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.7e-30 136.0 107 65.4
FAN17G0227 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.8e-27 126.7 147 49.7
FvH4_5g35255 Fragaria vesca HOM05D007743 ORTHO05D004645 3.5e-25 119.8 79 75.9
FAN18G0907 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.5e-25 119.8 79 75.9
FAN04G2392 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.4e-20 102.1 65 76.9
FAN01G1375 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN02G2674 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN03G2901 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN05G3774 Fragaria x ananassa HOM05D000550 ORTHO05D000400 3.7e-19 99.8 78 65.4
FAN07G2184 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN10G0736 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN13G2887 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN25G3322 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN27G1827 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.7e-19 99.8 78 65.4
FAN14G0024 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.1e-18 98.2 78 64.1
FAN18G4170 Fragaria x ananassa HOM05D007743 ORTHO05D004645 9.1e-18 95.1 78 62.8
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 2.0e-17 94.0 226 32.7
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 1.7e-16 90.9 226 32.3
FvH4_1g29460 Fragaria vesca HOM05D007743 ORTHO05D045698 1.6e-14 84.3 138 42.8
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 4.0e-13 79.7 209 31.1
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 5.2e-13 79.3 209 29.7
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 2.0e-12 77.4 222 32.4
Manes.07G048750 Manihot esculenta HOM05D007592 ORTHO05D004645 3.4e-12 76.6 205 34.1
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 3.4e-12 76.6 213 31.9
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 4.4e-12 76.3 209 28.7
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 5.7e-12 75.9 195 32.8
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 5.7e-12 75.9 209 28.7
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 7.5e-12 75.5 209 28.7
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 2.2e-11 73.9 207 33.3
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 6.3e-11 72.4 201 34.3
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 8.3e-11 72.0 200 31.0
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 8.3e-11 72.0 191 34.0
Manes.01G069750 Manihot esculenta HOM05D007592 ORTHO05D004645 4.1e-10 69.7 205 32.2
FAN06G3708 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.3e-10 69.3 108 42.6
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 7.0e-10 68.9 198 30.8
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 9.1e-10 68.6 200 29.0
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 9.1e-10 68.6 200 30.0
FvH4_6g21850 Fragaria vesca HOM05D007743 ORTHO05D046334 9.1e-10 68.6 109 40.4
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 2.0e-09 67.4 189 30.7
FvH4_5g16793 Fragaria vesca HOM05D007743 ORTHO05D004645 2.0e-09 67.4 54 63.0
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 2.7e-09 67.0 201 32.8
Atru.chr12.1217 Acer truncatum HOM05D007592 ORTHO05D004645 7.7e-09 65.5 211 27.0
AT2G13760 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.0e-08 65.1 181 26.5
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 1.0e-08 65.1 201 30.3
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 1.3e-08 64.7 201 30.3
CSS0029425 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 2.2e-08 63.9 101 39.6
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 6.5e-08 62.4 209 27.8
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 8.5e-08 62.0 198 28.8
AL2G23940 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.5e-07 61.2 190 28.4
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.2e-07 60.1 197 30.5
FAN08G1457 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.5e-07 59.3 98 40.8
FAN19G0066 Fragaria x ananassa HOM05D007743 ORTHO05D045698 1.6e-06 57.8 138 36.2
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 2.1e-06 57.4 220 30.9
Oeu023351.1 Olea europaea HOM05D007592 ORTHO05D004645 2.1e-06 57.4 184 29.9
FAN09G2025 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.6e-06 56.6 39 69.2
Manes.13G094101 Manihot esculenta HOM05D007592 ORTHO05D004645 4.7e-06 56.2 191 29.8
FAN18G0762 Fragaria x ananassa HOM05D007743 ORTHO05D004645 8.0e-06 55.5 55 58.2


User provided reference genes

Program Settings