Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 1.1e-33 146.0 71 100.0
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.4e-28 129.0 71 90.1
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 1.6e-27 125.6 70 88.6
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-27 125.6 70 88.6
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-27 125.6 70 88.6
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-27 125.6 70 88.6
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 6.0e-27 123.6 70 87.1
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 1.5e-25 119.0 71 83.1
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 2.5e-25 118.2 68 83.8
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 3.3e-25 117.9 68 83.8
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 3.3e-25 117.9 68 83.8
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 4.3e-25 117.5 64 89.1
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 4.3e-25 117.5 71 81.7
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 4.3e-25 117.5 71 81.7
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 4.3e-25 117.5 67 85.1
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 7.3e-25 116.7 69 82.6
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 9.5e-25 116.3 68 82.4
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 9.5e-25 116.3 68 82.4
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 1.2e-24 115.9 65 86.2
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.2e-24 115.9 69 79.7
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 1.2e-24 115.9 65 86.2
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 1.6e-24 115.5 65 84.6
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 2.1e-24 115.2 69 81.2
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 2.1e-24 115.2 64 85.9
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 2.1e-24 115.2 69 81.2
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 2.8e-24 114.8 68 82.4
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 2.8e-24 114.8 68 82.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.8e-24 114.8 64 85.9
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.8e-24 114.8 67 82.1
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 2.8e-24 114.8 67 80.6
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 3.6e-24 114.4 68 80.9
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 3.6e-24 114.4 69 79.7
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.6e-24 114.4 64 85.9
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 3.6e-24 114.4 64 85.9
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 3.6e-24 114.4 64 85.9
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 3.6e-24 114.4 65 84.6
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 3.6e-24 114.4 68 80.9
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 3.6e-24 114.4 68 79.4
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 4.7e-24 114.0 67 82.1
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 4.7e-24 114.0 65 84.6
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 4.7e-24 114.0 65 84.6
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 4.7e-24 114.0 64 85.9
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 4.7e-24 114.0 64 85.9
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 4.7e-24 114.0 67 82.1
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 4.7e-24 114.0 68 80.9
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 4.7e-24 114.0 68 80.9
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 4.7e-24 114.0 67 82.1
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 4.7e-24 114.0 64 85.9
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 4.7e-24 114.0 69 81.2
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 4.7e-24 114.0 64 85.9
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 6.2e-24 113.6 64 85.9
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 6.2e-24 113.6 67 82.1
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 6.2e-24 113.6 67 82.1
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 6.2e-24 113.6 64 84.4
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 8.0e-24 113.2 65 84.6
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 8.0e-24 113.2 67 82.1
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 8.0e-24 113.2 67 80.6
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 8.0e-24 113.2 64 84.4
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 8.0e-24 113.2 70 77.1
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 1.1e-23 112.8 68 80.9
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.1e-23 112.8 64 84.4
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 1.1e-23 112.8 64 84.4
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 1.1e-23 112.8 64 84.4
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.4e-23 112.5 68 79.4
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 1.4e-23 112.5 67 82.1
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.4e-23 112.5 67 82.1
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.4e-23 112.5 64 84.4
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-23 112.5 64 85.9
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.4e-23 112.5 67 80.6
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.4e-23 112.5 68 80.9
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 1.4e-23 112.5 72 77.8
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.4e-23 112.5 68 80.9
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 1.4e-23 112.5 68 77.9
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.4e-23 112.5 64 82.8
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 1.8e-23 112.1 64 84.4
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 1.8e-23 112.1 68 80.9
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.8e-23 112.1 68 80.9
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 1.8e-23 112.1 68 80.9
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 1.8e-23 112.1 64 84.4
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.8e-23 112.1 64 82.8
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.8e-23 112.1 64 84.4
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 1.8e-23 112.1 64 84.4
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.8e-23 112.1 65 81.5
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 2.3e-23 111.7 67 80.6
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 2.3e-23 111.7 67 80.6
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.3e-23 111.7 66 78.8
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.3e-23 111.7 67 80.6
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 3.1e-23 111.3 64 84.4
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 3.1e-23 111.3 64 84.4
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 3.1e-23 111.3 64 84.4
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 3.1e-23 111.3 67 79.1
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.1e-23 111.3 64 82.8
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 4.0e-23 110.9 66 78.8
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 4.0e-23 110.9 64 82.8
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 4.0e-23 110.9 68 79.4
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 4.0e-23 110.9 64 82.8
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 5.2e-23 110.5 66 77.3
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 5.2e-23 110.5 64 82.8
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 5.2e-23 110.5 64 82.8
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 5.2e-23 110.5 64 82.8
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 5.2e-23 110.5 68 76.5
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 6.8e-23 110.2 67 77.6
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 6.8e-23 110.2 64 81.2
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.2e-22 109.4 64 81.2
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.2e-22 109.4 64 81.2
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 1.2e-22 109.4 64 81.2
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.2e-22 109.4 64 81.2
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.2e-22 109.4 64 81.2
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.5e-22 109.0 64 82.8
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 2.0e-22 108.6 68 75.0
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 2.0e-22 108.6 67 79.1
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 2.0e-22 108.6 64 79.7
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.6e-22 108.2 62 80.6
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.6e-22 108.2 65 75.4
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.6e-22 108.2 68 75.0
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 3.4e-22 107.8 62 82.3
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 4.4e-22 107.5 64 79.7
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 5.8e-22 107.1 64 76.6
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.3e-21 105.9 68 72.1
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.3e-21 105.9 70 72.9
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.3e-21 105.9 64 76.6
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 2.2e-21 105.1 65 76.9
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.9e-21 104.8 64 79.7
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 2.9e-21 104.8 68 75.0
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 2.9e-21 104.8 64 76.6
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.9e-21 104.0 65 73.8
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 3.2e-20 101.3 68 72.1
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 9.2e-20 99.8 64 76.6
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 6.0e-19 97.1 68 70.6
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 3.0e-18 94.7 63 66.7
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 1.9e-17 92.0 63 65.1
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 2.5e-17 91.7 64 64.1
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 4.3e-17 90.9 61 68.9
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 9.5e-17 89.7 68 64.7
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 2.8e-16 88.2 64 65.6
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 6.8e-15 83.6 63 60.3
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.7e-13 77.8 68 64.7
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 3.7e-13 77.8 44 81.8
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 3.7e-13 77.8 45 82.2
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 2.4e-12 75.1 47 78.7
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 7.1e-12 73.6 53 67.9
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 9.2e-12 73.2 35 94.3
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 2.7e-11 71.6 35 91.4
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 1.0e-10 69.7 44 72.7
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 9.5e-09 63.2 32 90.6


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