Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 3.6e-92 341.7 186 100.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 2.5e-77 292.4 186 88.7
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.5e-77 292.4 186 88.7
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.8e-76 288.9 186 87.6
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.8e-68 262.3 186 81.7
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.4e-59 232.6 159 84.9
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 2.6e-42 176.0 228 52.2
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 4.2e-40 168.7 232 51.3
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 3.6e-39 165.6 189 56.6
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.2e-37 160.6 196 54.1
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 8.3e-36 154.5 192 55.7
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 4.1e-35 152.1 228 49.1
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 9.1e-35 151.0 191 54.5
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 7.7e-34 147.9 232 48.7
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 6.5e-33 144.8 175 51.4
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 8.5e-33 144.4 231 48.1
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.9e-32 143.3 193 51.3
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 4.2e-32 142.1 192 50.5
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 7.2e-32 141.4 190 52.6
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 1.2e-31 140.6 175 50.3
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.6e-31 140.2 147 57.1
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.6e-31 139.0 190 50.5
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 1.0e-30 137.5 179 50.3
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 1.0e-30 137.5 197 50.3
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 1.4e-30 137.1 179 53.1
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 1.8e-30 136.7 182 53.8
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 4.0e-30 135.6 193 52.3
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 4.0e-30 135.6 133 61.7
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 5.2e-30 135.2 164 54.9
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 6.8e-30 134.8 186 51.6
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 8.8e-30 134.4 190 52.1
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.0e-29 133.3 163 54.6
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 5.7e-29 131.7 194 51.0
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 9.8e-29 131.0 179 48.6
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 1.7e-28 130.2 193 51.3
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 2.2e-28 129.8 187 48.7
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 2.2e-28 129.8 153 50.3
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 2.2e-28 129.8 189 50.3
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 3.7e-28 129.0 163 52.1
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 6.3e-28 128.3 188 49.5
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 8.3e-28 127.9 196 46.4
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 7.0e-27 124.8 178 50.6
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 9.1e-27 124.4 192 49.0
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 9.1e-27 124.4 156 55.8
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.2e-26 124.0 202 49.5
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.2e-26 124.0 190 48.9
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.6e-26 123.6 181 47.5
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 2.0e-26 123.2 185 48.6
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 2.7e-26 122.9 184 46.2
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 4.5e-26 122.1 200 45.0
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 5.9e-26 121.7 193 45.6
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 1.0e-25 120.9 179 50.3
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 1.3e-25 120.6 179 48.6
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.3e-25 119.8 207 46.4
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 2.3e-25 119.8 177 48.0
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 6.6e-25 118.2 189 47.6
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 1.1e-24 117.5 178 46.6
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 3.3e-24 115.9 177 45.8
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 3.3e-24 115.9 176 45.5
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 4.2e-24 115.5 185 43.8
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 4.2e-24 115.5 177 46.3
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 9.5e-24 114.4 174 48.9
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.2e-23 114.0 179 46.4
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.2e-23 114.0 177 45.2
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.2e-23 114.0 199 47.2
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.2e-23 114.0 162 48.8
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.1e-23 113.2 179 45.8
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.1e-23 113.2 191 46.6
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 4.7e-23 112.1 201 45.3
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 8.0e-23 111.3 156 48.1
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.4e-22 110.5 165 49.1
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.8e-22 110.2 165 49.7
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 2.3e-22 109.8 177 44.6
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 2.3e-22 109.8 186 40.3
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 4.0e-22 109.0 178 46.1
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 6.8e-22 108.2 143 51.7
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.5e-21 107.1 190 48.4
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 2.0e-21 106.7 189 41.3
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 2.6e-21 106.3 187 46.0
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 3.4e-21 105.9 190 41.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 5.7e-21 105.1 136 52.2
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 9.8e-21 104.4 136 50.0
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.3e-20 104.0 163 46.0
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 2.8e-20 102.8 171 46.2
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 3.7e-20 102.4 208 41.8
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 1.1e-19 100.9 194 44.3
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 1.4e-19 100.5 177 43.5
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.1e-19 99.4 169 45.6
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 3.1e-19 99.4 163 48.5
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.3e-17 94.0 177 42.9
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 2.3e-17 93.2 185 41.6
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 2.3e-17 93.2 203 40.9
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.9e-17 92.8 169 44.4
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 3.9e-17 92.4 191 39.3
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.9e-16 90.1 112 55.4
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 9.5e-16 87.8 190 38.9
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 9.5e-16 87.8 200 41.5
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.3e-14 83.2 186 38.2
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.3e-14 83.2 186 38.2
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 3.1e-14 82.8 194 37.1
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 4.0e-14 82.4 186 37.6
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 6.8e-14 81.6 143 45.5
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.2e-13 80.9 152 43.4
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 2.6e-13 79.7 186 37.1
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 5.8e-13 78.6 66 68.2
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 2.2e-12 76.6 186 36.6
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 2.4e-11 73.2 142 40.1
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.2e-10 70.9 115 47.0
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.2e-10 70.9 120 44.2
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.6e-10 70.5 189 39.7
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 6.6e-09 65.1 141 39.0
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.1e-08 64.3 141 39.0
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 3.3e-08 62.8 120 41.7
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 6.8e-06 55.1 132 35.6
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 8.9e-06 54.7 88 44.3


User provided reference genes

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