Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 5.2e-179 630.9 320 100.0
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 6.2e-148 527.7 307 87.3
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 4.4e-146 521.5 310 85.5
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 2.4e-144 515.8 310 85.5
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 4.9e-121 438.3 307 76.2
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 1.5e-117 426.8 308 72.7
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 2.5e-117 426.0 313 75.4
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 1.2e-98 364.0 312 64.4
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 5.7e-93 345.1 285 68.1
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 5.7e-93 345.1 311 61.4
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 7.4e-93 344.7 310 63.2
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 1.4e-91 340.5 284 65.1
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 9.1e-91 337.8 238 72.7
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 1.5e-90 337.0 312 59.0
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 2.6e-90 336.3 297 60.9
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 3.8e-89 332.4 308 60.4
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 2.5e-88 329.7 272 63.6
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 5.5e-88 328.6 314 58.6
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 1.2e-87 327.4 311 61.1
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 1.2e-87 327.4 310 58.4
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 1.6e-87 327.0 312 60.3
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.4e-86 323.9 300 58.3
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 6.7e-86 321.6 323 56.0
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 7.4e-85 318.2 307 58.6
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 1.7e-84 317.0 235 68.9
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 2.2e-84 316.6 297 59.6
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 2.2e-84 316.6 256 66.8
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 2.2e-84 316.6 317 56.2
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 4.8e-84 315.5 219 72.1
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 8.2e-84 314.7 260 63.5
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 8.2e-84 314.7 273 63.0
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 4.1e-83 312.4 297 57.6
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 6.9e-83 311.6 315 58.4
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 1.2e-82 310.8 289 57.8
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 1.5e-82 310.5 251 62.2
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 1.5e-82 310.5 285 58.9
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 2.6e-82 309.7 319 56.4
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 5.9e-82 308.5 254 61.8
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 5.9e-82 308.5 252 63.5
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 1.0e-81 307.8 257 65.8
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 1.0e-81 307.8 266 61.3
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 1.0e-81 307.8 257 62.3
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 2.2e-81 306.6 266 61.7
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 3.8e-81 305.8 256 64.8
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 7.2e-80 301.6 238 63.9
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 7.2e-80 301.6 298 59.1
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 3.0e-78 296.2 318 53.1
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 3.0e-78 296.2 313 51.8
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 6.7e-78 295.0 302 53.3
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 1.1e-77 294.3 253 60.9
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 1.5e-77 293.9 283 57.2
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 2.6e-77 293.1 318 54.4
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 1.1e-75 287.7 236 62.7
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 4.1e-75 285.8 263 59.7
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 9.1e-75 284.6 259 59.8
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 4.5e-74 282.3 275 55.3
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 3.8e-73 279.3 278 55.8
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 5.0e-73 278.9 279 55.9
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 1.1e-72 277.7 279 55.6
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 1.1e-72 277.7 279 55.6
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 1.9e-72 276.9 276 55.4
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 8.0e-71 271.6 251 57.8
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 1.0e-70 271.2 277 54.2
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 3.0e-70 269.6 312 48.4
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 4.0e-70 269.2 278 54.7
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 6.7e-70 268.5 263 56.7
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 1.7e-68 263.8 169 75.7
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 4.1e-67 259.2 233 58.4
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 1.9e-64 250.4 317 49.5
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 2.6e-61 240.0 235 56.2
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 7.5e-61 238.4 140 82.1
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 5.4e-59 232.3 133 81.2
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 7.0e-59 231.9 133 82.7
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 2.0e-58 230.3 133 81.2
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 2.6e-53 213.4 186 63.4
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 8.6e-49 198.4 234 52.1
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 6.8e-46 188.7 210 51.0
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 1.1e-43 181.4 205 49.3
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 3.9e-41 172.9 199 47.7
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 1.3e-36 157.9 149 60.4
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 2.4e-27 127.1 152 46.7
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 9.5e-24 115.2 125 55.2
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 8.1e-15 85.5 63 65.1
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 5.2e-14 82.8 63 61.9


User provided reference genes

Program Settings