Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0284601 Rosa chinensis HOM05D001772 ORTHO05D000476 5.9e-80 300.8 154 100.0
RcHm_v2.0_Chr6g0282201 Rosa chinensis HOM05D001772 ORTHO05D000476 3.5e-64 248.4 142 87.3
RcHm_v2.0_Chr3g0456441 Rosa chinensis HOM05D001772 ORTHO05D000476 1.6e-61 239.6 143 86.7
FvH4_2g17470 Fragaria vesca HOM05D001772 ORTHO05D000476 4.3e-46 188.3 141 72.3
MD10G1147900 Malus domestica HOM05D001772 ORTHO05D000476 6.6e-39 164.5 172 57.0
Prupe.8G187000 Prunus persica HOM05D001772 ORTHO05D000476 4.3e-38 161.8 178 53.9
CiPaw.13G055700 Carya illinoinensis HOM05D001772 ORTHO05D000476 4.7e-29 131.7 169 49.1
CiPaw.14G044200 Carya illinoinensis HOM05D001772 ORTHO05D000476 4.0e-28 128.6 169 46.7
Haze_03506 Corylus avellana HOM05D001772 ORTHO05D000476 5.2e-28 128.3 161 47.8
Cfa010573 Carpinus fangiana HOM05D001772 ORTHO05D000476 2.0e-27 126.3 161 46.6
Actinidia23345 Actinidia chinensis HOM05D001772 ORTHO05D000476 1.3e-26 123.6 168 42.9
Sabra02G0182600 Salix brachista HOM05D001772 ORTHO05D000476 3.8e-26 122.1 155 49.0
Potri.002G239800 Populus trichocarpa HOM05D001772 ORTHO05D000476 8.4e-26 120.9 156 47.4
CANSAT01G0681 Cannabis sativa HOM05D001772 ORTHO05D000476 1.1e-25 120.6 139 51.1
Eucgr.K02359 Eucalyptus grandis HOM05D001772 ORTHO05D000476 1.1e-25 120.6 161 49.1
Manes.12G055400 Manihot esculenta HOM05D001772 ORTHO05D000476 1.4e-25 120.2 160 49.4
GSVIVG01001530001 Vitis vinifera HOM05D001772 ORTHO05D000476 2.4e-25 119.4 150 47.3
Dinv28791 Davidia involucrata HOM05D001772 ORTHO05D000476 3.2e-25 119.0 191 40.8
Gohir.A08G048200 Gossypium hirsutum HOM05D001772 ORTHO05D000476 5.4e-25 118.2 158 46.8
Thecc.01G207500 Theobroma cacao HOM05D001772 ORTHO05D000476 1.2e-24 117.1 171 43.9
ClCG09G008340 Citrullus lanatus HOM05D001772 ORTHO05D002266 2.1e-24 116.3 155 46.5
Duzib133G1118 Durio zibethinus HOM05D001772 ORTHO05D000476 6.0e-24 114.8 171 44.4
Sed0023396 Sechium edule HOM05D001772 ORTHO05D000476 6.0e-24 114.8 172 42.4
COL.COLO4_34275 Corchorus olitorius HOM05D001772 ORTHO05D000476 1.7e-23 113.2 159 44.0
MELO3C021127.2 Cucumis melo HOM05D001772 ORTHO05D000476 1.7e-23 113.2 96 59.4
arahy.Tifrunner.gnm1.ann1.6LLT9T Arachis hypogaea HOM05D001772 ORTHO05D000476 3.0e-23 112.5 162 45.1
arahy.Tifrunner.gnm1.ann1.Z5E7XJ Arachis hypogaea HOM05D001772 ORTHO05D000476 3.0e-23 112.5 162 45.1
Ca_08035_v3 Cicer arietinum L. HOM05D001772 ORTHO05D000476 6.6e-23 111.3 158 48.1
Nn7g37462 Nelumbo nucifera HOM05D001772 ORTHO05D000476 6.6e-23 111.3 136 45.6
SalBow3G3719 Salvia bowleyana HOM05D001772 ORTHO05D000476 6.6e-23 111.3 151 46.4
Ciclev10016082m.g Citrus clementina HOM05D001772 ORTHO05D000476 8.7e-23 110.9 145 45.5
Dinv35446 Davidia involucrata HOM05D001772 ORTHO05D000476 8.7e-23 110.9 184 41.3
Glyma.18G246700 Glycine max HOM05D001772 ORTHO05D000476 1.9e-22 109.8 153 42.5
Gohir.D08G058300 Gossypium hirsutum HOM05D001772 ORTHO05D000476 1.9e-22 109.8 154 43.5
QL09p045418 Quercus lobata HOM05D001772 ORTHO05D000476 1.9e-22 109.8 145 46.9
CsaV3_7G026740 Cucumis sativus L. HOM05D000439 ORTHO05D001363 2.5e-22 109.4 155 45.2
vmacro14687 Vaccinium macrocarpon HOM05D001772 ORTHO05D000476 4.3e-22 108.6 178 41.6
EL10Ac5g10585 Beta vulgaris HOM05D001772 ORTHO05D000476 7.3e-22 107.8 133 47.4
Actinidia29996 Actinidia chinensis HOM05D001772 ORTHO05D000476 9.6e-22 107.5 173 42.2
THA.LOC104808817 Tarenaya hassleriana HOM05D001772 ORTHO05D000476 9.6e-22 107.5 144 45.1
Migut.D00773 Erythranthe guttata HOM05D001772 ORTHO05D000476 1.3e-21 107.1 137 43.1
Lsat_1_v5_gn_9_16941 Lactuca sativa HOM05D001772 ORTHO05D000476 2.8e-21 105.9 147 44.2
Gorai.004G060200 Gossypium raimondii HOM05D001772 ORTHO05D000476 3.6e-21 105.5 154 42.2
Lj1g0002706 Lotus japonicus HOM05D001772 ORTHO05D000476 3.6e-21 105.5 155 41.3
TPR.G35837 Trifolium pratense HOM05D001772 ORTHO05D000476 3.6e-21 105.5 161 42.2
TAR362G0313 Trochodendron aralioides HOM05D001772 ORTHO05D000476 4.8e-21 105.1 163 38.7
Lj2C1111T5 Lonicera japonica HOM05D001772 ORTHO05D000476 8.1e-21 104.4 146 44.5
Medtr7g080890 Medicago truncatula HOM05D001772 ORTHO05D000476 8.1e-21 104.4 162 42.6
TWI36G1769 Tripterygium wilfordii HOM05D001772 ORTHO05D000476 8.1e-21 104.4 171 40.9
Phvul.008G050400 Phaseolus vulgaris HOM05D001772 ORTHO05D000476 1.1e-20 104.0 155 41.9
Nitab4.5_0008926g0020 Nicotiana tabacum HOM05D001772 ORTHO05D000476 1.8e-20 103.2 169 41.4
Oeu020366.1 Olea europaea HOM05D001772 ORTHO05D000476 2.4e-20 102.8 134 47.8
Cpa.g.sc8.39 Carica papaya HOM05D001772 ORTHO05D000476 3.1e-20 102.4 126 49.2
Aqoxy5G00066 Aquilegia oxysepala HOM05D001772 ORTHO05D000476 4.0e-20 102.1 90 54.4
Hund02807 Selenicereus undatus HOM05D001772 ORTHO05D000476 4.0e-20 102.1 138 44.9
Glyma.09G246300 Glycine max HOM05D001772 ORTHO05D000476 5.3e-20 101.7 61 70.5
MBI10_g28842_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D000476 5.3e-20 101.7 76 60.5
Nitab4.5_0000038g0390 Nicotiana tabacum HOM05D001772 ORTHO05D000476 6.9e-20 101.3 96 53.1
AUR62028644 Chenopodium quinoa HOM05D001772 ORTHO05D000476 9.0e-20 100.9 145 46.2
Cc01_g15860 Coffea canephora HOM05D001772 ORTHO05D000476 9.0e-20 100.9 74 64.9
Sp3g23000 Schrenkiella parvula HOM05D001772 ORTHO05D000476 9.0e-20 100.9 147 46.3
BcaB08g34454 Brassica carinata HOM05D001772 ORTHO05D000476 1.2e-19 100.5 97 53.6
Thhalv10002639m.g Eutrema salsugineum HOM05D001772 ORTHO05D000476 1.5e-19 100.1 147 46.9
Psat3g100920 Pisum sativum HOM05D001772 ORTHO05D000476 1.5e-19 100.1 141 44.7
PGR044G1970 Punica granatum HOM05D001772 ORTHO05D000476 1.5e-19 100.1 154 41.6
HanXRQChr07g0190571 Helianthus annuus HOM05D001772 ORTHO05D000476 2.0e-19 99.8 139 43.9
Lalb_Chr03g0040551 Lupinus albus HOM05D001772 ORTHO05D000476 2.6e-19 99.4 164 41.5
Peaxi162Scf02239g00025 Petunia axillaris HOM05D001772 ORTHO05D000476 2.6e-19 99.4 67 62.7
SGA_v2.0_scaffold8G04491 Striga asiatica HOM05D001772 ORTHO05D000476 2.6e-19 99.4 134 44.0
Carub.0003s2580 Capsella rubella HOM05D001772 ORTHO05D000476 3.4e-19 99.0 134 47.0
PGSC0003DMG400021910 Solanum tuberosum HOM05D001772 ORTHO05D000476 3.4e-19 99.0 82 57.3
VMungo1383G2637 Vigna mungo HOM05D001772 ORTHO05D000476 3.4e-19 99.0 77 54.5
BolC3t17745H Brassica oleracea HOM05D001772 ORTHO05D000476 5.8e-19 98.2 132 46.2
AT3G25480 Arabidopsis thaliana HOM05D001772 ORTHO05D000476 9.9e-19 97.4 134 45.5
AUR62008067 Chenopodium quinoa HOM05D001772 ORTHO05D000476 1.3e-18 97.1 148 42.6
CAN.G311.18 Capsicum annuum HOM05D001772 ORTHO05D000476 2.2e-18 96.3 94 52.1
AL3G41600 Arabidopsis lyrata HOM05D001772 ORTHO05D000476 2.9e-18 95.9 133 47.4
BcaC01g03224 Brassica carinata HOM05D001772 ORTHO05D000476 3.8e-18 95.5 132 45.5
C03p54580 Brassica napus HOM05D001772 ORTHO05D000476 3.8e-18 95.5 132 45.5
CARHR101780 Cardamine hirsuta HOM05D001772 ORTHO05D000476 6.4e-18 94.7 92 55.4
A03p44200 Brassica napus HOM05D001772 ORTHO05D000476 8.4e-18 94.4 132 44.7
BraA03t13549Z Brassica rapa HOM05D001772 ORTHO05D000476 8.4e-18 94.4 132 44.7
ATR0743G233 Amborella trichopoda HOM05D001772 ORTHO05D000476 1.4e-17 93.6 175 37.7
Solyc09g042770.4 Solanum lycopersicum HOM05D001772 ORTHO05D000476 1.4e-17 93.6 131 42.0
unitig_62.g23942 Utricularia gibba HOM05D001772 ORTHO05D000476 1.9e-17 93.2 146 36.3
PSO357G0631 Papaver somniferum HOM05D001772 ORTHO05D000476 3.2e-17 92.4 158 38.6
Sopen09g015820 Solanum pennellii HOM05D001772 ORTHO05D000476 4.2e-17 92.0 79 55.7
PSO170G5618 Papaver somniferum HOM05D001772 ORTHO05D000476 9.3e-17 90.9 157 38.9
Os01g0889800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D000476 4.6e-16 88.6 76 53.9
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 6.0e-16 88.2 49 75.5
CDE02G4114 Ceratophyllum demersum HOM05D001772 ORTHO05D000476 3.0e-15 85.9 77 51.9
CDE09G0012 Ceratophyllum demersum HOM05D001772 ORTHO05D000476 1.9e-14 83.2 113 43.4
HPP92_003443 Vanilla planifolia HOM05D001772 ORTHO05D000476 4.3e-14 82.0 135 37.8
Sed0027176 Sechium edule HOM05D001772 ORTHO05D000476 1.3e-13 80.5 63 61.9
Zm00001eb365870 Zea mays HOM05D001772 ORTHO05D000476 1.8e-12 76.6 82 47.6
Sc17g0001580 Simmondsia chinensis HOM05D001772 ORTHO05D000476 1.2e-11 73.9 99 39.4
Rhsim01G0247500 Rhododendron simsii HOM05D001772 ORTHO05D000476 6.4e-10 68.2 42 66.7
ECA247G0275 Erigeron canadensis HOM05D001772 ORTHO05D000476 1.3e-07 60.5 42 61.9
MD05G1153600 Malus domestica HOM05D001772 ORTHO05D000476 2.5e-06 56.2 36 63.9


User provided reference genes

Program Settings