Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0283651 Rosa chinensis HOM05D008330 ORTHO05D010281 4.2e-67 258.1 149 100.0
FvH4_2g18301 Fragaria vesca HOM05D008330 ORTHO05D010281 5.7e-56 221.1 149 83.9
RcHm_v2.0_Chr6g0283621 Rosa chinensis HOM05D008330 ORTHO05D010281 5.8e-40 167.9 149 68.5
FvH4_2g18250 Fragaria vesca HOM05D008330 ORTHO05D010281 4.1e-38 161.8 149 57.7
Prupe.8G195400 Prunus persica HOM05D008330 ORTHO05D010281 2.7e-37 159.1 150 60.7
FAN15G3032 Fragaria x ananassa HOM05D008330 ORTHO05D010281 1.1e-35 153.7 149 55.7
FAN27G1390 Fragaria x ananassa HOM05D000599 ORTHO05D000554 3.3e-35 152.1 143 56.6
Prupe.8G195200 Prunus persica HOM05D008330 ORTHO05D010281 4.7e-34 148.3 153 54.9
MD05G1166900 Malus domestica HOM05D008330 ORTHO05D010281 4.0e-33 145.2 153 53.6
Manes.13G051600 Manihot esculenta HOM05D008330 ORTHO05D010281 2.2e-31 139.4 150 54.7
Thecc.01G215900 Theobroma cacao HOM05D008330 ORTHO05D010281 1.1e-30 137.1 150 52.0
Actinidia09458 Actinidia chinensis HOM05D000599 ORTHO05D010281 2.1e-29 132.9 144 49.3
Ciclev10032995m.g Citrus clementina HOM05D008330 ORTHO05D010281 1.3e-28 130.2 150 46.7
CiPaw.13G049800 Carya illinoinensis HOM05D008330 ORTHO05D010281 8.7e-28 127.5 150 46.7
Manes.12G050200 Manihot esculenta HOM05D008330 ORTHO05D010281 1.9e-27 126.3 150 49.3
Atru.chr6.1449 Acer truncatum HOM05D008330 ORTHO05D010281 3.3e-27 125.6 150 46.0
COL.COLO4_16118 Corchorus olitorius HOM05D008330 ORTHO05D010281 3.3e-27 125.6 150 46.0
Duzib133G0427 Durio zibethinus HOM05D008330 ORTHO05D010281 4.3e-27 125.2 150 47.3
Oeu064646.1 Olea europaea HOM05D008330 ORTHO05D010281 1.6e-26 123.2 148 43.9
TAR633G1328 Trochodendron aralioides HOM05D008330 ORTHO05D010281 2.8e-26 122.5 150 45.3
TAR633G1148 Trochodendron aralioides HOM05D008330 ORTHO05D010281 3.6e-26 122.1 150 44.7
Gohir.D07G096300 Gossypium hirsutum HOM05D008330 ORTHO05D010281 6.9e-25 117.9 150 49.3
Gorai.001G103600 Gossypium raimondii HOM05D008330 ORTHO05D010281 6.9e-25 117.9 150 49.3
Potri.002G247600 Populus trichocarpa HOM05D008330 ORTHO05D010281 6.9e-25 117.9 151 42.4
Gohir.A07G091600 Gossypium hirsutum HOM05D008330 ORTHO05D010281 2.6e-24 115.9 150 44.7
Haze_03361 Corylus avellana HOM05D008330 ORTHO05D010281 4.9e-23 111.7 150 51.3
CiPaw.14G039500 Carya illinoinensis HOM05D008330 ORTHO05D010281 2.4e-22 109.4 151 40.4
Sc05g0001880 Simmondsia chinensis HOM05D008330 ORTHO05D010281 7.1e-22 107.8 150 42.7
Cpa.g.sc8.116 Carica papaya HOM05D001402 ORTHO05D001302 1.2e-21 107.1 135 43.0
Ah.08g214800 Amaranthus hybridus HOM05D008330 ORTHO05D010281 1.6e-21 106.7 150 41.3
MD10G1156800 Malus domestica HOM05D008330 ORTHO05D010281 3.5e-21 105.5 122 46.7
Sabra02G0188500 Salix brachista HOM05D001402 ORTHO05D001302 3.5e-21 105.5 144 41.7
Migut.D02518 Erythranthe guttata HOM05D008330 ORTHO05D010281 1.3e-20 103.6 148 34.5
Cfa010412 Carpinus fangiana HOM05D008330 ORTHO05D010281 8.7e-20 100.9 150 48.7
Ca_07505_v3 Cicer arietinum L. HOM05D008330 ORTHO05D010281 1.5e-19 100.1 150 38.0
vmacro02798 Vaccinium macrocarpon HOM05D000599 ORTHO05D000554 4.3e-19 98.6 147 40.1
MBI11_g07404_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D002274 3.6e-18 95.5 137 46.0
Lsat_1_v5_gn_8_89060 Lactuca sativa HOM05D008330 ORTHO05D010281 4.8e-18 95.1 147 44.9
AUR62001154 Chenopodium quinoa HOM05D008330 ORTHO05D010281 2.4e-17 92.8 146 43.8
TPR.G6400 Trifolium pratense HOM05D008330 ORTHO05D010281 3.4e-16 89.0 150 34.0
TPR.G29159 Trifolium pratense HOM05D008330 ORTHO05D010281 9.9e-16 87.4 150 34.0
Nn1g08172 Nelumbo nucifera HOM05D008330 ORTHO05D010281 2.2e-15 86.3 149 36.2
arahy.Tifrunner.gnm1.ann1.02NPIP Arachis hypogaea HOM05D008330 ORTHO05D010281 1.0e-12 77.4 148 36.5
Nn3g20084 Nelumbo nucifera HOM05D008330 ORTHO05D010281 1.0e-12 77.4 149 39.6
Nn1g08173 Nelumbo nucifera HOM05D008330 ORTHO05D010281 1.8e-12 76.6 149 40.9
Sp3g22820 Schrenkiella parvula HOM05D014270 ORTHO05D010281 3.3e-11 72.4 141 32.6
Ah.08g214810 Amaranthus hybridus HOM05D008330 ORTHO05D010281 4.3e-11 72.0 156 37.8
Thhalv10002922m.g Eutrema salsugineum HOM05D014270 ORTHO05D010281 1.3e-10 70.5 145 32.4
AUR62016522 Chenopodium quinoa HOM05D008330 ORTHO05D010281 3.7e-10 68.9 109 46.8
arahy.Tifrunner.gnm1.ann1.P3ZVD3 Arachis hypogaea HOM05D008330 ORTHO05D010281 4.8e-10 68.6 148 31.8
ECA236G1728 Erigeron canadensis HOM05D008330 ORTHO05D010281 6.2e-10 68.2 146 40.4
BolC7t41540H Brassica oleracea HOM05D014270 ORTHO05D010281 4.0e-09 65.5 141 31.2
C07p10740 Brassica napus HOM05D014270 ORTHO05D010281 6.9e-09 64.7 141 31.2
AL3G41070 Arabidopsis lyrata HOM05D014270 ORTHO05D010281 2.0e-08 63.2 141 28.4
AL3G40920 Arabidopsis lyrata HOM05D014270 ORTHO05D010281 2.6e-08 62.8 141 28.4
A07p07130 Brassica napus HOM05D014270 ORTHO05D010281 2.6e-08 62.8 141 30.5
Lj1g0017201 Lotus japonicus HOM05D008330 ORTHO05D010281 2.6e-08 62.8 150 28.7
Rhsim01G0250700 Rhododendron simsii HOM05D000599 ORTHO05D000554 4.5e-08 62.0 109 40.4
ATR0561G155 Amborella trichopoda HOM05D008330 ORTHO05D010281 1.7e-07 60.1 143 26.6
Medtr7g053580 Medicago truncatula HOM05D008330 ORTHO05D010281 1.1e-06 57.4 64 46.9
vmacro14718 Vaccinium macrocarpon HOM05D000599 ORTHO05D000554 4.2e-06 55.5 104 33.7


User provided reference genes

Program Settings