Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0279961 Rosa chinensis HOM05D008097 ORTHO05D010102 1.6e-70 269.2 131 100.0
FvH4_2g20801 Fragaria vesca HOM05D008097 ORTHO05D000167 4.8e-38 161.4 128 60.9
FvH4_7g10254 Fragaria vesca HOM05D008097 ORTHO05D010102 7.1e-34 147.5 128 56.2
FvH4_3g23591 Fragaria vesca HOM05D000003 ORTHO05D000004 6.2e-22 107.8 93 55.9
RcHm_v2.0_Chr7g0187741 Rosa chinensis HOM05D008097 ORTHO05D010102 1.9e-15 86.3 109 44.0
RcHm_v2.0_Chr1g0354891 Rosa chinensis HOM05D008097 ORTHO05D010102 7.4e-15 84.3 109 43.1
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-14 82.0 111 41.4
Atru.chr7.1015 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-13 78.2 111 39.6
Atru.chr4.686 Acer truncatum HOM05D000003 ORTHO05D000126 1.5e-12 76.6 122 32.8
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 2.0e-12 76.3 122 37.7
Atru.chr13.2597 Acer truncatum HOM05D000003 ORTHO05D000004 3.4e-12 75.5 125 37.6
RcHm_v2.0_Chr4g0437761 Rosa chinensis HOM05D008097 ORTHO05D010102 2.9e-11 72.4 121 33.9
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 8.4e-11 70.9 125 34.4
Atru.chr9.909 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-10 70.5 123 33.3
Atru.chr6.529 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-10 70.1 125 33.6
Prupe.3G126800 Prunus persica HOM05D008097 ORTHO05D010102 1.4e-10 70.1 121 32.2
Prupe.6G204400 Prunus persica HOM05D000003 ORTHO05D015270 1.4e-10 70.1 121 33.9
Atru.chr10.1454 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-10 69.3 99 41.4
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 2.5e-10 69.3 127 31.5
RcHm_v2.0_Chr5g0047711 Rosa chinensis HOM05D008833 ORTHO05D000167 3.2e-10 68.9 121 33.1
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 7.2e-10 67.8 124 31.5
Atru.chr10.1536 Acer truncatum HOM05D000003 ORTHO05D000167 9.3e-10 67.4 111 33.3
Prupe.7G076800 Prunus persica HOM05D000003 ORTHO05D000167 9.3e-10 67.4 122 34.4
FAN25G3685 Fragaria x ananassa HOM05D008097 ORTHO05D010102 1.2e-09 67.0 119 31.9
Prupe.2G082600 Prunus persica HOM05D000003 ORTHO05D000167 1.2e-09 67.0 121 32.2
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 1.2e-09 67.0 121 32.2
Atru.chr4.85 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-09 66.6 111 35.1
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.6e-09 66.6 109 33.9
FAN24G1586 Fragaria x ananassa HOM05D008097 ORTHO05D010102 1.6e-09 66.6 119 31.9
Atru.chr4.152 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-09 66.2 123 32.5
Atru.chr9.1934 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-09 66.2 121 31.4
FAN11G0161 Fragaria x ananassa HOM05D008097 ORTHO05D010102 2.1e-09 66.2 121 30.6
FvH4_4g31671 Fragaria vesca HOM05D008097 ORTHO05D010102 2.7e-09 65.9 119 31.9
Prupe.3G133900 Prunus persica HOM05D000003 ORTHO05D000167 2.7e-09 65.9 114 32.5
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-09 65.5 111 34.2
Atru.chr12.998 Acer truncatum HOM05D000003 ORTHO05D000167 3.5e-09 65.5 99 36.4
Atru.chr2.2049 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-09 65.5 125 31.2
Atru.chr6.748 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-09 65.5 122 31.1
FAN25G2016 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.5e-09 65.5 119 31.9
Prupe.1G205500 Prunus persica HOM05D000003 ORTHO05D000167 3.5e-09 65.5 107 33.6
FAN12G0796 Fragaria x ananassa HOM05D008097 ORTHO05D010102 4.6e-09 65.1 119 31.9
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 6.1e-09 64.7 114 35.1
FAN26G0914 Fragaria x ananassa HOM05D008097 ORTHO05D010102 6.1e-09 64.7 116 31.9
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 7.9e-09 64.3 135 29.6
FAN02G0134 Fragaria x ananassa HOM05D008097 ORTHO05D010102 7.9e-09 64.3 119 31.9
Atru.chr5.1570 Acer truncatum HOM05D004045 ORTHO05D004923 1.0e-08 63.9 106 37.7
FAN16G0608 Fragaria x ananassa HOM05D008097 ORTHO05D010102 1.0e-08 63.9 119 31.1
RcHm_v2.0_Chr1g0339311 Rosa chinensis HOM05D008097 ORTHO05D010102 1.0e-08 63.9 111 32.4
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 1.0e-08 63.9 119 32.8
Atru.chr6.1886 Acer truncatum HOM05D000003 ORTHO05D000006 1.3e-08 63.5 123 31.7
Atru.chr11.1019 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-08 63.2 100 34.0
Atru.chr6.1733 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-08 63.2 121 31.4
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 62.8 123 30.9
Atru.chr12.1685 Acer truncatum HOM05D000003 ORTHO05D000167 3.0e-08 62.4 111 32.4
FvH4_4g28900 Fragaria vesca HOM05D008097 ORTHO05D010102 3.0e-08 62.4 119 31.1
FAN03G2020 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.0e-08 62.4 119 30.3
Prupe.3G283300 Prunus persica HOM05D000003 ORTHO05D000167 3.0e-08 62.4 98 38.8
FAN14G3279 Fragaria x ananassa HOM05D008097 ORTHO05D010102 3.9e-08 62.0 112 33.9
RcHm_v2.0_Chr1g0320561 Rosa chinensis HOM05D008833 ORTHO05D010662 3.9e-08 62.0 101 36.6
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-08 61.6 121 30.6
Atru.chr4.1036 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-08 61.6 125 29.6
Atru.chr9.177 Acer truncatum HOM05D000003 ORTHO05D000167 5.1e-08 61.6 110 31.8
Atru.chr12.1232 Acer truncatum HOM05D000003 ORTHO05D000167 8.7e-08 60.8 111 31.5
FvH4_3g37001 Fragaria vesca HOM05D000003 ORTHO05D000006 8.7e-08 60.8 98 32.7
FAN01G2727 Fragaria x ananassa HOM05D000003 ORTHO05D011454 1.1e-07 60.5 118 31.4
Atru.chr3.1566 Acer truncatum HOM05D000003 ORTHO05D000167 1.5e-07 60.1 102 31.4
FAN10G0366 Fragaria x ananassa HOM05D008097 ORTHO05D010102 1.5e-07 60.1 111 32.4
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-07 60.1 124 29.8
Atru.chr1.2765 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-07 59.7 89 36.0
Atru.chr1.3769 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-07 59.7 114 33.3
Atru.chr4.3086 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-07 59.7 121 33.9
Atru.chr6.486 Acer truncatum HOM05D000003 ORTHO05D000167 1.9e-07 59.7 105 34.3
FAN22G0690 Fragaria x ananassa HOM05D013595 ORTHO05D010662 1.9e-07 59.7 104 27.9
RcHm_v2.0_Chr4g0413301 Rosa chinensis HOM05D008833 ORTHO05D010662 1.9e-07 59.7 109 31.2
Atru.chr13.1861 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-07 59.3 107 30.8
Atru.chr2.1340 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-07 59.3 118 29.7
Atru.chr7.1139 Acer truncatum HOM05D000003 ORTHO05D000167 2.5e-07 59.3 101 31.7
Sed0018752 Sechium edule HOM05D000003 ORTHO05D000167 2.5e-07 59.3 121 30.6
Atru.chr1.3779 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-07 58.9 118 30.5
Atru.chr4.1446 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-07 58.9 94 37.2
Atru.chr4.218 Acer truncatum HOM05D000003 ORTHO05D000167 3.3e-07 58.9 103 30.1
Atru.chr7.419 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-07 58.9 117 28.2
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 3.3e-07 58.9 121 28.1
Atru.chr6.782 Acer truncatum HOM05D000003 ORTHO05D000167 4.3e-07 58.5 100 37.0
FvH4_3g21341 Fragaria vesca HOM05D008097 ORTHO05D010102 4.3e-07 58.5 119 31.1
Atru.chr1.2404 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-07 58.2 94 34.0
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 5.7e-07 58.2 112 29.5
Prupe.8G101300 Prunus persica HOM05D008097 ORTHO05D010102 5.7e-07 58.2 105 36.2
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 7.4e-07 57.8 115 30.4
Atru.chr8.1312 Acer truncatum HOM05D000003 ORTHO05D000167 7.4e-07 57.8 106 33.0
Atru.chr11.221 Acer truncatum HOM05D000003 ORTHO05D000167 9.7e-07 57.4 96 33.3
Atru.chr3.1273 Acer truncatum HOM05D000003 ORTHO05D000167 9.7e-07 57.4 114 31.6
Atru.chr4.1214 Acer truncatum HOM05D000003 ORTHO05D000167 9.7e-07 57.4 115 32.2
Atru.chr6.1712 Acer truncatum HOM05D000003 ORTHO05D000167 9.7e-07 57.4 106 32.1
Atru.chr8.486 Acer truncatum HOM05D000003 ORTHO05D000004 9.7e-07 57.4 111 30.6
Atru.chr11.1957 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.0 110 31.8
Atru.chr11.717 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 92 37.0
Atru.chr1.2954 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 108 33.3
Atru.chr10.866 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-06 56.6 96 31.2
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 98 29.6
Atru.chr3.3369 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 115 29.6
Atru.chr9.707 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 106 33.0
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.6e-06 56.6 97 33.0
RcHm_v2.0_Chr5g0038961 Rosa chinensis HOM05D008833 ORTHO05D000167 1.6e-06 56.6 109 33.0
Atru.chr13.1080 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 56.2 97 35.1
FAN09G1860 Fragaria x ananassa HOM05D000003 ORTHO05D011454 2.2e-06 56.2 108 31.5
FAN14G3628 Fragaria x ananassa HOM05D008097 ORTHO05D010102 2.2e-06 56.2 119 30.3
Prupe.6G141500 Prunus persica HOM05D000003 ORTHO05D000167 2.2e-06 56.2 121 27.3
RcHm_v2.0_Chr4g0389021 Rosa chinensis HOM05D000003 ORTHO05D000167 2.8e-06 55.8 95 31.6
Atru.chr10.1383 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-06 55.5 104 32.7
Atru.chr2.2370 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-06 55.5 101 32.7
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 3.7e-06 55.5 124 28.2
FAN12G2205 Fragaria x ananassa HOM05D013595 ORTHO05D010662 3.7e-06 55.5 104 26.0
Atru.chr2.3253 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-06 55.1 111 29.7
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 4.8e-06 55.1 126 28.6
Atru.chr1.1585 Acer truncatum HOM05D000003 ORTHO05D000167 6.3e-06 54.7 119 29.4
Atru.chr12.2338 Acer truncatum HOM05D000003 ORTHO05D000167 6.3e-06 54.7 105 29.5
Atru.chr5.1622 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-06 54.7 94 36.2
Atru.chr9.1187 Acer truncatum HOM05D000003 ORTHO05D000167 6.3e-06 54.7 111 28.8
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 6.3e-06 54.7 122 26.2
Prupe.3G063400 Prunus persica HOM05D000003 ORTHO05D000167 6.3e-06 54.7 95 34.7
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 8.2e-06 54.3 93 34.4


User provided reference genes

Program Settings