Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.2e-80 303.1 159 100.0
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 2.7e-72 275.4 159 90.6
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 2.0e-70 269.2 159 88.7
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 3.4e-70 268.5 159 88.7
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 2.2e-69 265.8 159 87.4
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.3e-66 256.5 168 82.1
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 4.9e-53 211.5 162 71.6
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 2.6e-38 162.5 111 80.2
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 7.8e-35 151.0 173 53.8
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 3.0e-34 149.1 152 55.9
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 1.1e-33 147.1 121 69.4
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 1.2e-32 143.7 162 51.9
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 6.8e-31 137.9 162 50.0
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.6e-30 136.0 148 53.4
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 4.4e-30 135.2 162 50.0
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 7.6e-30 134.4 129 55.0
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 2.9e-29 132.5 156 48.7
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 3.7e-29 132.1 167 50.3
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 6.4e-29 131.3 99 72.7
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.4e-28 130.2 154 50.0
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.4e-28 130.2 154 50.0
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.4e-28 130.2 154 50.0
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 1.4e-28 130.2 158 51.3
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.9e-28 129.8 129 55.0
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.9e-28 129.8 109 63.3
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 2.4e-28 129.4 144 51.4
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 3.2e-28 129.0 147 50.3
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 5.4e-28 128.3 147 53.1
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 7.1e-28 127.9 161 50.9
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.2e-27 127.1 97 69.1
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 1.2e-27 127.1 128 54.7
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 2.7e-27 125.9 105 66.7
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 2.7e-27 125.9 98 71.4
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 7.8e-27 124.4 157 47.8
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.3e-26 123.6 152 46.1
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 1.3e-26 123.6 94 67.0
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.7e-26 123.2 113 64.6
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 5.1e-26 121.7 160 51.2
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 8.6e-26 120.9 163 48.5
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 8.6e-26 120.9 100 62.0
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 2.5e-25 119.4 159 47.2
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 2.5e-25 119.4 122 55.7
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 4.3e-25 118.6 104 66.3
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 5.6e-25 118.2 137 51.8
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 7.3e-25 117.9 145 51.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 1.2e-24 117.1 98 63.3
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 4.7e-24 115.2 109 59.6
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 6.2e-24 114.8 133 50.4
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 8.1e-24 114.4 134 50.7
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 1.4e-23 113.6 122 53.3
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 1.8e-23 113.2 125 53.6
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 2.4e-23 112.8 136 50.7
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 2.4e-23 112.8 163 47.2
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 4.0e-23 112.1 141 51.8
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 4.0e-23 112.1 170 45.9
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 1.2e-22 110.5 112 58.0
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.5e-22 110.2 128 46.1
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 1.5e-22 110.2 102 61.8
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 4.4e-22 108.6 93 62.4
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 7.6e-22 107.8 157 46.5
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 9.9e-22 107.5 112 56.2
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 1.3e-21 107.1 97 61.9
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.7e-21 106.7 90 65.6
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 4.9e-21 105.1 101 61.4
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 6.4e-21 104.8 105 58.1
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 6.4e-21 104.8 84 65.5
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 1.1e-20 104.0 93 60.2
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 1.1e-20 104.0 93 60.2
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 1.4e-20 103.6 91 61.5
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.9e-20 103.2 102 55.9
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 7.1e-20 101.3 104 57.7
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 2.1e-19 99.8 154 46.8
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 2.7e-19 99.4 98 60.2
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 3.5e-19 99.0 98 58.2
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 4.6e-19 98.6 83 66.3
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 4.6e-19 98.6 128 44.5
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 6.0e-19 98.2 109 54.1
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 2.3e-18 96.3 155 46.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 2.3e-18 96.3 79 69.6
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.3e-18 96.3 84 60.7
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 6.6e-18 94.7 128 46.1
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 8.7e-18 94.4 128 46.1
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 1.1e-17 94.0 155 45.8
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 1.5e-17 93.6 64 78.1
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.9e-17 93.2 121 46.3
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.5e-17 92.8 155 43.9
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.5e-17 92.8 83 60.2
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 4.3e-17 92.0 155 43.9
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 2.1e-16 89.7 76 65.8
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 2.8e-16 89.4 154 44.2
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 2.8e-16 89.4 80 57.5
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 4.8e-16 88.6 116 43.1
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 4.8e-16 88.6 89 57.3
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 6.9e-15 84.7 75 64.0
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 6.9e-15 84.7 54 88.9
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.5e-09 67.0 125 36.0
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 5.6e-09 65.1 152 30.9
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 1.6e-08 63.5 64 48.4
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 3.6e-08 62.4 118 35.6
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 6.2e-08 61.6 81 43.2
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 8.1e-08 61.2 98 38.8
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 1.8e-07 60.1 94 35.1


User provided reference genes

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