Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0278661 Rosa chinensis HOM05D020638 ORTHO05D015199 1.4e-67 259.6 146 100.0
RcHm_v2.0_Chr1g0322121 Rosa chinensis HOM05D020638 ORTHO05D015199 1.1e-51 206.8 129 92.2
RcHm_v2.0_Chr3g0468651 Rosa chinensis HOM05D020638 ORTHO05D015199 2.0e-37 159.5 93 100.0
RcHm_v2.0_Chr6g0306091 Rosa chinensis HOM05D020638 ORTHO05D015199 2.2e-36 156.0 120 78.3
MD16G1158000 Malus domestica HOM05D020638 ORTHO05D015199 3.7e-23 112.1 120 59.2
Atru.chr3.1415 Acer truncatum HOM05D005012 ORTHO05D005886 5.7e-08 61.6 52 57.7
TAR625G1047 Trochodendron aralioides HOM05D009698 ORTHO05D015199 5.7e-08 61.6 56 55.4
Atru.chr4.1287 Acer truncatum HOM05D035676 ORTHO05D015199 1.7e-07 60.1 52 57.7
Atru.chr1.3691 Acer truncatum HOM05D005012 ORTHO05D005886 2.2e-07 59.7 52 55.8
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 2.2e-07 59.7 50 58.0
Atru.chr2.1590 Acer truncatum HOM05D035676 ORTHO05D015199 3.7e-07 58.9 52 55.8
Atru.chr12.2341 Acer truncatum HOM05D035676 ORTHO05D015199 4.8e-07 58.5 53 52.8
TAR375G1082 Trochodendron aralioides HOM05D009698 ORTHO05D000385 8.2e-07 57.8 67 47.8
TAR040G0004 Trochodendron aralioides HOM05D009698 ORTHO05D015199 1.1e-06 57.4 47 57.4
TAR625G0072 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.1e-06 57.4 60 50.0
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.4e-06 56.2 51 52.9
Prupe.1G266200 Prunus persica HOM05D020638 ORTHO05D015199 4.1e-06 55.5 83 49.4
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 4.1e-06 55.5 86 39.5
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-06 55.1 72 41.7
TAR636G2298 Trochodendron aralioides HOM05D009698 ORTHO05D000385 5.3e-06 55.1 64 46.9
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.1e-06 54.3 49 51.0
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.1e-06 54.3 51 52.9


User provided reference genes

Program Settings