Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.7e-266 922.2 489 100.0
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-202 710.3 489 79.8
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 4.2e-196 688.3 489 77.7
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.5e-193 679.1 489 77.5
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.4e-174 615.5 438 77.4
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 7.5e-145 518.1 500 62.8
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.3e-132 476.1 486 60.1
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 4.7e-123 445.7 509 55.6
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 3.5e-118 429.5 505 55.8
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 6.0e-118 428.7 520 54.2
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.3e-109 401.0 510 54.5
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.4e-103 380.9 517 51.5
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 2.3e-101 373.6 503 50.7
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.1e-100 371.3 495 52.7
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.5e-100 370.2 510 52.2
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 2.1e-99 367.1 536 50.2
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 4.4e-97 359.4 471 53.3
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.2e-96 357.1 520 51.5
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 1.2e-94 351.3 499 48.9
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.6e-94 349.4 503 50.7
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 7.6e-89 332.0 540 46.3
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 2.9e-88 330.1 499 48.1
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.4e-87 327.8 505 49.5
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.5e-84 317.8 506 48.8
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.1e-83 312.0 495 47.5
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.1e-82 311.6 517 46.0
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 7.6e-81 305.4 468 49.1
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 7.6e-81 305.4 453 48.8
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 3.8e-80 303.1 499 47.1
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 6.4e-80 302.4 449 49.4
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 2.4e-79 300.4 502 44.8
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 1.0e-77 295.0 490 46.5
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 6.7e-77 292.4 450 48.7
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 1.5e-76 291.2 448 47.5
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 3.4e-73 280.0 461 44.9
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 5.8e-73 279.3 481 43.7
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 1.3e-72 278.1 497 44.1
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.4e-71 274.6 538 43.7
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 5.5e-71 272.7 477 43.2
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 7.4e-68 262.3 501 42.1
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 9.6e-68 261.9 491 44.8
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.3e-67 261.5 514 42.4
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.6e-67 261.2 503 44.7
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.6e-67 261.2 490 44.1
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 4.8e-67 259.6 449 44.8
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 1.4e-66 258.1 490 43.9
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.4e-65 253.4 520 41.2
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 4.5e-65 253.1 487 42.1
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 4.5e-65 253.1 487 42.1
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 5.9e-65 252.7 453 42.6
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 5.0e-64 249.6 403 46.9
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.1e-63 248.4 462 43.7
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.2e-63 246.5 504 43.7
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 4.6e-62 243.0 449 43.7
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 1.3e-61 241.5 452 45.4
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 5.1e-61 239.6 493 42.6
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 5.1e-61 239.6 505 42.0
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.6e-59 234.6 289 52.6
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 3.7e-59 233.4 553 37.8
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 4.8e-59 233.0 399 48.6
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 1.8e-58 231.1 482 41.3
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 1.2e-57 228.4 504 41.3
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 8.5e-56 222.2 460 40.7
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 9.4e-55 218.8 450 38.4
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 3.6e-54 216.9 508 38.8
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 1.8e-53 214.5 502 40.6
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 5.1e-53 213.0 504 39.5
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.1e-52 211.8 523 37.7
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.5e-49 201.4 499 38.7
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 2.6e-49 200.7 453 41.1
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.0e-48 198.7 641 33.2
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.0e-48 198.7 485 40.8
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 5.0e-48 196.4 399 42.1
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 6.5e-48 196.1 441 39.5
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 4.2e-47 193.4 492 40.9
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 2.3e-45 187.6 236 51.7
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 2.0e-44 184.5 503 38.0
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 4.4e-44 183.3 465 38.7
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.7e-43 181.4 497 37.4
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.1e-42 178.7 449 38.1
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.4e-42 178.3 363 43.5
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.4e-42 178.3 498 37.1
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.0e-41 174.5 513 33.5
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 1.7e-40 171.4 445 37.8
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 3.8e-40 170.2 496 37.1
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.9e-39 167.9 222 54.1
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 2.3e-37 161.0 531 34.8
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 1.2e-36 158.7 463 37.6
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 1.5e-36 158.3 499 34.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 2.0e-36 157.9 495 35.6
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 5.7e-36 156.4 497 35.6
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 7.5e-36 156.0 220 49.5
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 7.5e-36 156.0 463 36.7
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 5.3e-34 149.8 295 39.7
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 7.0e-34 149.4 125 66.4
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 7.0e-34 149.4 499 33.1
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 9.1e-34 149.1 493 34.3
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 9.1e-34 149.1 449 34.1
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.2e-33 148.7 326 39.0
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 3.8e-32 143.7 608 32.1
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.1e-31 142.1 494 33.6
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 1.9e-31 141.4 457 35.2
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.9e-31 141.4 224 46.0
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 2.5e-31 141.0 144 56.9
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 5.5e-31 139.8 453 36.4
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.4e-29 135.2 325 39.7
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 5.2e-29 133.3 324 39.5
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.4e-26 125.2 229 42.4
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 2.0e-25 121.3 77 83.1
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 4.7e-22 110.2 611 28.6
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 6.1e-22 109.8 74 79.7
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 4.4e-20 103.6 156 47.4
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.4e-20 103.6 106 52.8
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 4.9e-19 100.1 446 30.3
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 4.9e-19 100.1 446 30.3
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 5.4e-18 96.7 177 42.9
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 7.0e-18 96.3 441 28.6
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 5.6e-15 86.7 314 36.6
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.2e-11 74.7 66 62.1
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.6e-09 68.6 105 39.0
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 1.9e-07 61.6 411 26.5


User provided reference genes

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