Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 6.2e-213 743.8 361 100.0
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 4.2e-193 677.9 352 92.0
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 9.3e-185 650.2 416 78.1
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.2e-184 649.8 416 77.9
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.1e-181 639.0 360 84.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 1.5e-174 616.3 358 82.7
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 3.8e-162 575.1 358 76.0
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.7e-160 568.9 359 74.1
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.3e-159 565.8 360 74.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 3.9e-159 565.1 357 74.5
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.5e-158 563.1 351 74.1
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.5e-158 563.1 359 74.9
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 3.7e-157 558.5 359 71.9
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.8e-156 556.2 354 72.9
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 3.1e-156 555.4 353 73.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 6.9e-156 554.3 354 72.0
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 2.6e-155 552.4 356 71.6
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 3.4e-155 552.0 359 71.0
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 2.9e-154 548.9 352 72.7
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 2.9e-154 548.9 352 71.9
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 2.5e-153 545.8 350 71.4
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 2.7e-152 542.3 456 61.2
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.0e-151 540.4 354 72.0
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 1.8e-151 539.7 330 76.4
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.5e-150 536.6 351 70.7
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.3e-149 533.5 358 70.9
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.3e-149 533.5 353 69.7
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.7e-149 533.1 353 69.1
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 8.2e-149 530.8 354 70.9
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 8.2e-149 530.8 353 68.8
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 3.1e-148 528.9 353 69.7
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.5e-147 525.4 355 70.4
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.3e-146 523.5 353 68.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 5.0e-146 521.5 351 69.2
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 1.1e-145 520.4 389 64.8
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.9e-145 519.6 356 67.7
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 4.2e-145 518.5 353 69.1
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 4.2e-145 518.5 360 67.2
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 4.2e-145 518.5 355 69.6
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 9.4e-145 517.3 355 67.0
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 9.4e-145 517.3 356 67.7
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 9.7e-142 507.3 356 68.5
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.2e-141 506.1 354 67.5
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 3.7e-141 505.4 352 65.6
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.2e-139 500.4 352 66.5
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.6e-139 500.0 354 66.9
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.6e-139 500.0 351 67.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 2.0e-139 499.6 358 63.1
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 3.8e-138 495.4 352 65.9
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 5.0e-138 495.0 355 68.2
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 8.5e-138 494.2 325 70.2
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.5e-137 493.4 352 64.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.5e-137 492.7 354 66.7
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 2.7e-136 489.2 364 63.2
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 6.8e-135 484.6 352 63.9
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 5.9e-131 471.5 353 63.7
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.9e-131 471.5 353 63.7
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.3e-130 470.3 353 63.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 5.0e-130 468.4 505 50.9
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 6.5e-130 468.0 362 61.9
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 7.2e-129 464.5 353 64.0
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.1e-124 450.7 464 50.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.0e-119 432.6 354 60.7
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 2.6e-110 402.9 286 67.1
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 2.6e-94 349.7 357 47.6
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 3.8e-93 345.9 290 59.3
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.4e-86 322.8 191 75.4
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 9.9e-86 321.2 237 65.4
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.7e-85 320.5 197 74.1
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.4e-84 316.6 358 44.7
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 5.4e-84 315.5 344 51.7
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 3.0e-74 283.1 215 65.6
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 1.3e-64 251.1 162 69.8
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 4.8e-64 249.2 249 53.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.4e-63 247.7 147 74.1
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 2.9e-61 240.0 240 50.0
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.0e-53 214.9 357 34.7
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-53 213.8 140 70.0
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 6.1e-51 205.7 159 61.6
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.6e-43 181.0 422 29.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 2.7e-43 180.3 116 71.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.0e-38 164.1 128 64.1
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 4.2e-36 156.4 377 30.0
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 2.2e-29 134.0 123 51.2
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.0e-29 132.9 74 75.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 4.2e-28 129.8 103 63.1
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 9.4e-28 128.6 70 78.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-27 128.3 102 58.8
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.2e-25 121.7 101 55.4
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.5e-25 121.3 74 67.6
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.5e-25 121.3 74 67.6
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-25 121.3 113 53.1
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.5e-25 119.0 67 83.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.7e-25 118.6 67 82.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.8e-24 117.1 67 82.1
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.2e-24 115.5 67 82.1
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 7.0e-23 112.5 292 27.7
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.5e-20 102.8 144 43.8
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.2e-19 101.7 75 58.7
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.5e-17 94.7 60 68.3
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 8.3e-16 89.0 54 74.1
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.3e-16 89.0 53 66.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.4e-15 86.3 73 49.3
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-12 78.2 53 64.2
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.3e-10 70.9 62 58.1
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.1e-07 62.0 94 39.4
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.1e-07 62.0 129 37.2


User provided reference genes

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