Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 4.8e-85 317.8 158 100.0
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 8.8e-55 217.2 168 68.5
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 7.5e-54 214.2 168 68.5
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.0e-47 193.7 172 65.1
FAN20G0410 Fragaria x ananassa HOM05D007935 ORTHO05D007393 4.5e-35 151.8 149 59.7
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 7.8e-19 97.8 181 45.3
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.5e-17 93.6 90 55.6
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 2.8e-16 89.4 155 38.1
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 2.2e-13 79.7 168 34.5
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 1.1e-12 77.4 169 38.5
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 3.2e-12 75.9 156 37.8
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 5.4e-12 75.1 175 35.4
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 7.1e-12 74.7 178 34.8
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 1.2e-11 73.9 154 37.7
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.2e-11 73.9 184 35.3
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 1.6e-11 73.6 163 36.8
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.0e-10 70.9 190 33.2
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 1.7e-10 70.1 157 36.9
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 2.3e-10 69.7 163 38.0
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 2.3e-10 69.7 169 32.5
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 3.0e-10 69.3 169 32.5
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 3.0e-10 69.3 154 33.1
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 3.9e-10 68.9 180 32.8
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 1.5e-09 67.0 186 32.3
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.9e-09 66.6 184 34.2
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 1.9e-09 66.6 93 44.1
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 3.3e-09 65.9 163 33.1
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 3.3e-09 65.9 164 34.8
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 4.3e-09 65.5 177 32.8
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 5.6e-09 65.1 167 32.9
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 7.3e-09 64.7 170 32.9
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.6e-08 63.5 162 30.2
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 8.1e-08 61.2 169 32.0
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 1.1e-07 60.8 172 33.7
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 1.4e-07 60.5 155 34.2
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 1.8e-07 60.1 167 34.1
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.8e-07 60.1 160 36.2
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 4.0e-07 58.9 151 31.8
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 6.8e-07 58.2 159 34.0
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 1.2e-06 57.4 160 34.4
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 2.0e-06 56.6 152 33.6
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 2.0e-06 56.6 160 33.1
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 2.6e-06 56.2 155 32.9
BcaC03g15309 Brassica carinata HOM05D010479 ORTHO05D007393 3.4e-06 55.8 171 31.6
BolC2t08970H Brassica oleracea HOM05D010479 ORTHO05D007393 3.4e-06 55.8 171 31.6
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.4e-06 55.8 170 31.8
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 3.4e-06 55.8 163 29.4
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 4.4e-06 55.5 179 29.6
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 7.6e-06 54.7 86 43.0
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 9.9e-06 54.3 180 29.4


User provided reference genes

Program Settings