Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 3.7e-82 308.1 156 100.0
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 5.6e-62 241.1 154 81.8
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 7.3e-62 240.7 154 81.2
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.3e-61 240.0 154 81.2
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 9.0e-60 233.8 154 79.9
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.5e-59 233.0 154 79.2
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 1.9e-57 226.1 163 72.4
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 5.5e-41 171.4 164 59.8
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 3.5e-40 168.7 126 69.8
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.1e-38 163.7 160 55.0
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 1.8e-36 156.4 163 53.4
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 2.4e-36 156.0 163 53.4
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 3.1e-36 155.6 160 51.9
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 5.3e-36 154.8 164 56.1
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.0e-34 150.6 162 56.8
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 2.2e-34 149.4 164 53.0
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 3.8e-34 148.7 164 53.7
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 5.0e-34 148.3 160 51.9
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 6.5e-34 147.9 165 53.3
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.1e-33 147.1 157 54.1
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.5e-33 146.0 159 53.5
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 5.5e-33 144.8 160 53.8
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 2.7e-32 142.5 158 49.4
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 7.9e-32 141.0 164 49.4
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 7.9e-32 141.0 158 49.4
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 1.4e-31 140.2 160 50.6
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 5.1e-31 138.3 169 47.9
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 1.5e-30 136.7 182 49.5
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 3.3e-30 135.6 169 46.7
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 4.3e-30 135.2 163 51.5
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 9.7e-30 134.0 158 47.5
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 9.7e-30 134.0 165 48.5
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 1.7e-29 133.3 162 46.3
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 2.4e-28 129.4 172 44.8
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 2.0e-27 126.3 120 51.7
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 2.6e-27 125.9 174 44.3
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 7.7e-27 124.4 121 52.9
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 1.0e-26 124.0 163 46.0
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.7e-26 123.2 125 50.4
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 3.8e-26 122.1 175 42.3
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 7.2e-25 117.9 135 46.7
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 9.4e-25 117.5 142 50.0
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 9.4e-25 117.5 159 45.9
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 2.1e-24 116.3 170 41.2
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 2.3e-23 112.8 128 50.0
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 3.0e-23 112.5 150 44.7
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 5.1e-23 111.7 161 42.2
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 6.7e-23 111.3 162 43.8
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 8.8e-23 110.9 168 44.0
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 8.8e-23 110.9 116 50.9
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.1e-22 110.5 162 38.3
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 4.4e-22 108.6 163 42.9
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 4.4e-22 108.6 151 45.7
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 9.7e-22 107.5 136 46.3
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 2.2e-21 106.3 129 47.3
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 3.7e-21 105.5 140 45.0
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 3.7e-21 105.5 168 41.1
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 4.8e-21 105.1 138 45.7
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 4.8e-21 105.1 138 45.7
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 4.8e-21 105.1 148 39.2
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 6.3e-21 104.8 127 47.2
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 8.2e-21 104.4 143 44.1
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 8.2e-21 104.4 171 39.8
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.1e-20 104.0 168 40.5
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 1.8e-20 103.2 126 46.0
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 1.8e-20 103.2 155 37.4
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 2.4e-20 102.8 137 43.8
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 3.1e-20 102.4 125 52.8
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 4.1e-20 102.1 143 44.8
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 7.0e-20 101.3 124 46.0
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 1.2e-19 100.5 149 40.3
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 1.5e-19 100.1 138 44.2
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 3.5e-19 99.0 100 56.0
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 4.5e-19 98.6 129 43.4
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 4.5e-19 98.6 119 42.0
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 4.5e-19 98.6 125 41.6
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 5.9e-19 98.2 128 43.8
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 7.7e-19 97.8 68 72.1
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 1.0e-18 97.4 126 45.2
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.3e-18 97.1 151 38.4
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 2.2e-18 96.3 137 43.1
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 5.0e-18 95.1 109 45.0
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 8.5e-18 94.4 139 42.4
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 2.5e-17 92.8 160 38.8
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 4.7e-16 88.6 149 38.9
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 6.1e-16 88.2 132 37.1
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 8.0e-16 87.8 154 38.3
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 1.8e-15 86.7 147 33.3
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 2.3e-15 86.3 70 58.6
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 7.4e-14 81.3 63 58.7
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 3.1e-12 75.9 141 36.2
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 5.9e-11 71.6 63 54.0
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 3.8e-10 68.9 47 70.2
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 1.9e-09 66.6 100 39.0


User provided reference genes

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