Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0269251 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-51 205.7 95 100.0
RcHm_v2.0_Chr1g0352291 Rosa chinensis HOM05D000539 ORTHO05D000233 1.2e-43 179.5 95 90.5
RcHm_v2.0_Chr3g0460901 Rosa chinensis HOM05D000539 ORTHO05D000233 7.9e-43 176.8 95 88.4
RcHm_v2.0_Chr4g0385451 Rosa chinensis HOM05D000539 ORTHO05D000233 8.5e-29 130.2 93 64.5
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-28 128.6 93 66.7
RcHm_v2.0_Chr4g0424111 Rosa chinensis HOM05D000539 ORTHO05D000592 2.5e-28 128.6 93 62.4
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 5.5e-28 127.5 93 65.6
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-27 125.9 93 64.5
RcHm_v2.0_Chr7g0211271 Rosa chinensis HOM05D000539 ORTHO05D000233 3.6e-27 124.8 93 65.6
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-25 118.2 93 62.4
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 3.3e-25 118.2 93 62.4
DCAR_031512 Daucus carota HOM05D000539 ORTHO05D000592 2.9e-13 78.6 88 45.5
RcHm_v2.0_Chr6g0250691 Rosa chinensis HOM05D000539 ORTHO05D000592 4.9e-08 61.2 54 50.0
Prupe.4G261200 Prunus persica HOM05D000539 ORTHO05D000592 2.4e-07 58.9 96 34.4
Prupe.5G062900 Prunus persica HOM05D000539 ORTHO05D000592 2.4e-07 58.9 96 34.4
Prupe.8G058300 Prunus persica HOM05D000539 ORTHO05D000592 2.4e-07 58.9 96 34.4
FAN25G1321 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.4e-07 57.8 94 35.1
Prupe.1G193900 Prunus persica HOM05D000539 ORTHO05D000592 5.4e-07 57.8 97 33.0
Prupe.2G157500 Prunus persica HOM05D000539 ORTHO05D000592 5.4e-07 57.8 97 33.0
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 5.4e-07 57.8 97 33.0
Prupe.1G130900 Prunus persica HOM05D000539 ORTHO05D000233 7.0e-07 57.4 97 34.0
Prupe.1G185000 Prunus persica HOM05D000539 ORTHO05D000592 9.2e-07 57.0 96 32.3
Prupe.3G129900 Prunus persica HOM05D000539 ORTHO05D000592 9.2e-07 57.0 96 33.3
Prupe.8G059600 Prunus persica HOM05D000539 ORTHO05D000592 9.2e-07 57.0 96 34.4
Prupe.1G199400 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.1G202700 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.1G237300 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.1G397800 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.2G090400 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 1.2e-06 56.6 97 32.0
Prupe.3G118800 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.6G180100 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.7G033400 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.8G047800 Prunus persica HOM05D000539 ORTHO05D000592 1.2e-06 56.6 97 32.0
Prupe.1G173700 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 97 32.0
Prupe.1G183700 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 96 33.3
Prupe.2G062000 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 97 32.0
Prupe.2G089500 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 97 32.0
Prupe.5G023300 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 97 32.0
Prupe.6G142900 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 97 32.0
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 1.6e-06 56.2 97 32.0
Prupe.1G036300 Prunus persica HOM05D000539 ORTHO05D000592 2.0e-06 55.8 97 30.9
Prupe.2G045600 Prunus persica HOM05D000539 ORTHO05D000592 2.0e-06 55.8 97 30.9
Prupe.4G092400 Prunus persica HOM05D000539 ORTHO05D000592 2.0e-06 55.8 93 32.3
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 2.0e-06 55.8 97 30.9
Prupe.8G055800 Prunus persica HOM05D000539 ORTHO05D000592 2.0e-06 55.8 97 30.9
FvH4_7g07223 Fragaria vesca HOM05D000539 ORTHO05D000592 2.7e-06 55.5 95 34.7
Prupe.3G103000 Prunus persica HOM05D000539 ORTHO05D000592 2.7e-06 55.5 97 32.0
FAN10G1931 Fragaria x ananassa HOM05D002161 ORTHO05D002619 4.5e-06 54.7 95 34.7
FAN20G3111 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.9e-06 54.3 93 34.4
Prupe.2G094600 Prunus persica HOM05D000539 ORTHO05D000592 5.9e-06 54.3 97 30.9


User provided reference genes

Program Settings