Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0268401 Rosa chinensis HOM05D058121 ORTHO05D347973 1.4e-23 112.1 54 100.0
RcHm_v2.0_Chr6g0267821 Rosa chinensis HOM05D058121 ORTHO05D348218 6.8e-23 109.8 54 98.1
FAN08G1015 Fragaria x ananassa HOM05D001256 ORTHO05D001141 3.3e-09 64.3 33 90.9
FAN04G2903 Fragaria x ananassa HOM05D001256 ORTHO05D001141 6.1e-08 60.1 38 76.3
FAN18G4556 Fragaria x ananassa HOM05D001256 ORTHO05D001141 8.0e-08 59.7 33 81.8
FvH4_5g14700 Fragaria vesca HOM05D001256 ORTHO05D001141 1.0e-07 59.3 33 81.8
FAN13G1517 Fragaria x ananassa HOM05D001256 ORTHO05D001141 1.0e-07 59.3 33 81.8
RcHm_v2.0_Chr7g0181691 Rosa chinensis HOM05D001256 ORTHO05D001141 1.4e-07 58.9 29 93.1
CAN.G837.32 Capsicum annuum HOM05D001256 ORTHO05D001141 1.8e-07 58.5 33 78.8
Nitab4.5_0010278g0030 Nicotiana tabacum HOM05D001256 ORTHO05D001141 1.8e-07 58.5 33 78.8
Solyc03g115870.3 Solanum lycopersicum HOM05D001256 ORTHO05D001141 1.8e-07 58.5 33 78.8
PGSC0003DMG400019506 Solanum tuberosum HOM05D001256 ORTHO05D001141 1.8e-07 58.5 33 78.8
Nitab4.5_0005226g0020 Nicotiana tabacum HOM05D001256 ORTHO05D001141 2.3e-07 58.2 36 80.6
Ah.11g048320 Amaranthus hybridus HOM05D001256 ORTHO05D001141 3.1e-07 57.8 30 86.7
Nitab4.5_0008297g0010 Nicotiana tabacum HOM05D001256 ORTHO05D001141 4.0e-07 57.4 33 75.8
Peaxi162Scf00106g00324 Petunia axillaris HOM05D001256 ORTHO05D001141 4.0e-07 57.4 29 86.2
Sopen03g034860 Solanum pennellii HOM05D001256 ORTHO05D001141 4.0e-07 57.4 33 75.8
Peaxi162Scf00274g00438 Petunia axillaris HOM05D001256 ORTHO05D001141 5.2e-07 57.0 37 73.0
Cfa018929 Carpinus fangiana HOM05D001256 ORTHO05D001141 6.8e-07 56.6 30 80.0
Nitab4.5_0003381g0020 Nicotiana tabacum HOM05D001256 ORTHO05D001141 6.8e-07 56.6 36 77.8
CANSAT80G1568 Cannabis sativa HOM05D001256 ORTHO05D001141 8.9e-07 56.2 29 82.8
GSVIVG01007985001 Vitis vinifera HOM05D001256 ORTHO05D001141 8.9e-07 56.2 29 82.8
Manes.14G080100 Manihot esculenta HOM05D001256 ORTHO05D001141 1.2e-06 55.8 30 80.0
Glyma.04G167500 Glycine max HOM05D001256 ORTHO05D001141 1.5e-06 55.5 38 68.4
Prupe.5G195400 Prunus persica HOM05D001256 ORTHO05D001141 1.5e-06 55.5 29 86.2
AUR62008434 Chenopodium quinoa HOM05D001256 ORTHO05D001141 2.6e-06 54.7 31 74.2
AUR62021659 Chenopodium quinoa HOM05D001256 ORTHO05D001141 2.6e-06 54.7 31 77.4
Dinv10644 Davidia involucrata HOM05D001256 ORTHO05D001141 2.6e-06 54.7 29 79.3
Glyma.06G195100 Glycine max HOM05D001256 ORTHO05D001141 2.6e-06 54.7 29 79.3
Hma1.2p1_0637F.1_g193630 Hydrangea macrophylla HOM05D001256 ORTHO05D001141 2.6e-06 54.7 30 80.0
QL10p017231 Quercus lobata HOM05D001256 ORTHO05D001141 3.4e-06 54.3 33 75.8
TWI81G0219 Tripterygium wilfordii HOM05D001256 ORTHO05D001141 3.4e-06 54.3 30 80.0
MD06G1195500 Malus domestica HOM05D001256 ORTHO05D001141 5.8e-06 53.5 29 79.3
MD14G1202600 Malus domestica HOM05D001256 ORTHO05D001141 5.8e-06 53.5 29 75.9
Ciclev10021497m.g Citrus clementina HOM05D001256 ORTHO05D001141 7.5e-06 53.1 29 79.3
Hma1.2p1_0060F.1_g033640 Hydrangea macrophylla HOM05D001256 ORTHO05D001141 7.5e-06 53.1 29 79.3
Sed0009034 Sechium edule HOM05D001256 ORTHO05D001141 7.5e-06 53.1 29 75.9
DCAR_016568 Daucus carota HOM05D001256 ORTHO05D001141 9.8e-06 52.8 31 67.7
Phvul.009G186300 Phaseolus vulgaris HOM05D001256 ORTHO05D001141 9.8e-06 52.8 29 75.9


User provided reference genes

Program Settings