Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 4.4e-145 518.1 290 100.0
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 5.8e-113 411.4 289 79.2
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.9e-112 408.3 289 78.9
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.2e-105 387.1 287 76.0
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.0e-104 381.7 289 75.8
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.8e-75 286.2 304 60.5
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 5.0e-64 248.8 316 54.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 4.4e-44 182.6 184 57.1
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 6.4e-43 178.7 280 49.6
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.9e-42 177.2 271 48.7
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 3.2e-42 176.4 143 69.2
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 5.4e-42 175.6 240 47.1
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 5.4e-42 175.6 179 59.2
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 7.0e-42 175.3 279 46.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.2e-41 174.5 224 53.6
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.6e-41 174.1 112 79.5
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 2.0e-41 173.7 289 45.3
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 2.0e-41 173.7 296 45.3
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 2.7e-41 173.3 296 45.3
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 3.5e-41 172.9 180 56.7
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 6.0e-41 172.2 242 44.6
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 7.8e-41 171.8 182 56.6
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 1.3e-40 171.0 146 67.8
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.3e-40 171.0 146 67.8
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.7e-40 170.6 94 93.6
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.7e-40 170.6 146 67.8
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 3.0e-40 169.9 92 93.5
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 3.0e-40 169.9 281 45.2
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 5.0e-40 169.1 246 47.2
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 6.6e-40 168.7 309 46.3
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.1e-39 167.9 151 61.6
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-39 167.9 92 94.6
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.1e-39 167.9 249 48.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 1.9e-39 167.2 276 47.1
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 2.5e-39 166.8 243 46.9
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 2.5e-39 166.8 143 65.7
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 2.5e-39 166.8 176 56.2
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.3e-39 166.4 299 41.5
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 9.5e-39 164.9 151 58.9
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.2e-38 164.5 233 48.9
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.6e-38 164.1 130 67.7
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.6e-38 164.1 136 64.0
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 2.1e-38 163.7 126 65.9
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.1e-38 163.7 132 68.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 2.1e-38 163.7 142 66.9
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.8e-38 163.3 182 54.9
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 3.6e-38 162.9 156 60.3
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 3.6e-38 162.9 271 41.3
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 4.7e-38 162.5 184 54.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 6.2e-38 162.2 152 58.6
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 6.2e-38 162.2 160 58.1
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 8.1e-38 161.8 182 54.4
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 8.1e-38 161.8 129 65.9
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.1e-37 161.4 156 59.0
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.1e-37 161.4 241 50.6
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.1e-37 161.4 265 43.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.1e-37 161.4 147 57.8
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.4e-37 161.0 268 45.1
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.8e-37 160.6 142 63.4
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.8e-37 160.6 117 70.1
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 4.0e-37 159.5 145 63.4
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 8.9e-37 158.3 152 56.6
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 2.0e-36 157.1 256 42.6
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.6e-36 156.8 282 39.7
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 2.6e-36 156.8 187 51.3
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 3.4e-36 156.4 299 42.1
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 4.4e-36 156.0 139 63.3
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 4.4e-36 156.0 281 44.5
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 9.8e-36 154.8 164 55.5
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.3e-35 154.5 148 60.1
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 2.2e-35 153.7 131 62.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 6.4e-35 152.1 156 60.3
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 8.3e-35 151.8 142 59.2
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 8.3e-35 151.8 142 59.2
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.1e-34 151.4 271 45.4
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.4e-34 151.0 296 44.3
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.4e-34 151.0 264 42.4
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.4e-34 151.0 182 51.1
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 3.2e-34 149.8 144 59.7
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 5.4e-34 149.1 186 50.5
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 5.4e-34 149.1 151 54.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.2e-33 147.9 295 44.4
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.6e-33 147.5 142 59.9
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 2.1e-33 147.1 139 61.2
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.6e-33 146.0 306 42.8
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 6.0e-33 145.6 130 60.8
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 7.8e-33 145.2 263 42.2
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.3e-32 144.4 138 62.3
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 2.3e-32 143.7 302 43.4
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.0e-32 143.3 145 57.2
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 5.1e-32 142.5 257 42.4
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 6.6e-32 142.1 116 63.8
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 5.6e-31 139.0 240 42.1
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 7.3e-31 138.7 150 56.0
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.2e-30 137.9 299 43.8
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 6.2e-30 135.6 99 73.7
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.8e-29 134.0 295 38.6
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 6.8e-29 132.1 196 45.9
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 8.9e-29 131.7 96 74.0
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 8.9e-29 131.7 96 74.0
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 5.8e-28 129.0 134 53.0
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.3e-27 127.9 231 40.7
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.3e-27 127.9 231 40.7
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 3.2e-26 123.2 245 40.8
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.7e-25 120.2 116 58.6
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 6.0e-25 119.0 233 36.9
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.8e-22 110.2 76 77.6
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.8e-22 110.2 76 77.6
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-21 108.2 59 91.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 6.9e-21 105.5 96 64.6
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 9.3e-18 95.1 122 43.4
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.1e-17 94.0 96 50.0
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 7.8e-17 92.0 211 46.0
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 7.8e-17 92.0 107 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 8.7e-16 88.6 110 45.5
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 2.5e-15 87.0 104 54.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.3e-14 84.7 55 74.5
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 4.5e-12 76.3 48 79.2
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 7.6e-12 75.5 53 75.5
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 2.2e-11 73.9 51 72.5
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 9.6e-07 58.5 80 40.0


User provided reference genes

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