Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0264731 Rosa chinensis HOM05D004345 ORTHO05D005192 3.7e-117 424.9 208 100.0
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 1.0e-66 257.3 139 90.6
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.4e-54 215.7 139 77.7
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 4.4e-54 215.3 139 76.3
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 5.8e-54 214.9 139 77.7
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 5.8e-54 214.9 139 76.3
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 5.8e-38 161.8 139 59.0
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 1.9e-36 156.8 138 56.5
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 3.2e-28 129.4 139 52.5
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 2.1e-27 126.7 139 51.1
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 2.5e-25 119.8 138 44.9
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 4.3e-25 119.0 139 46.8
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 2.1e-24 116.7 156 43.6
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 8.1e-24 114.8 138 44.2
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.5e-22 110.5 138 44.2
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 2.0e-22 110.2 139 43.9
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.6e-22 109.8 138 44.9
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 3.4e-22 109.4 138 44.2
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 3.4e-22 109.4 134 44.8
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 4.4e-22 109.0 142 43.0
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 5.8e-22 108.6 138 44.2
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 5.8e-22 108.6 124 46.8
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 7.6e-22 108.2 139 40.3
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 7.6e-22 108.2 139 40.3
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.2e-21 106.7 138 44.9
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 2.2e-21 106.7 136 44.1
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 3.8e-21 105.9 138 39.1
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 4.9e-21 105.5 139 45.3
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 6.4e-21 105.1 139 39.6
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 8.4e-21 104.8 139 43.2
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 8.4e-21 104.8 141 41.8
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.4e-20 104.0 138 42.8
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 3.2e-20 102.8 139 38.1
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 4.2e-20 102.4 148 43.2
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 7.8e-19 98.2 139 42.4
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 5.1e-18 95.5 139 36.0
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 7.3e-17 91.7 139 35.3
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 9.6e-17 91.3 136 41.9
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.6e-16 90.5 138 36.2
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 3.6e-16 89.4 144 40.3
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.1e-15 87.8 139 36.0
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 1.4e-15 87.4 140 39.3
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 2.4e-15 86.7 158 33.5
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 6.9e-15 85.1 136 37.5
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 5.8e-14 82.0 136 36.0
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 7.6e-14 81.6 140 35.0
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 2.2e-13 80.1 139 32.4
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 4.9e-13 79.0 140 36.4
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 4.9e-13 79.0 138 37.0
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 1.1e-12 77.8 118 39.0
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 3.2e-12 76.3 130 36.2
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 2.7e-11 73.2 91 47.3
Aqoxy7G01729 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.0e-10 71.2 110 41.8
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 1.0e-10 71.2 128 34.4
Oeu028553.1 Olea europaea HOM05D004345 ORTHO05D005192 2.3e-10 70.1 142 33.8
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.1e-09 67.8 83 42.2
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.9e-09 67.0 79 43.0
Oeu011014.1 Olea europaea HOM05D004345 ORTHO05D005192 2.5e-09 66.6 142 33.8
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 2.1e-08 63.5 134 31.3
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 8.1e-08 61.6 131 35.9
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 1.4e-07 60.8 126 33.3
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 1.8e-07 60.5 128 33.6
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 3.1e-07 59.7 144 31.9
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.6e-06 56.6 83 33.7
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 4.5e-06 55.8 137 29.2
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 5.8e-06 55.5 106 39.6
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 5.8e-06 55.5 106 39.6
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 7.6e-06 55.1 133 29.3
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 9.9e-06 54.7 140 30.0


User provided reference genes

Program Settings