Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0263181 Rosa chinensis HOM05D008702 ORTHO05D003639 3.9e-263 911.0 482 100.0
RcHm_v2.0_Chr6g0253701 Rosa chinensis HOM05D008702 ORTHO05D003639 1.8e-252 875.5 481 96.7
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 5.7e-246 854.0 481 94.6
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 2.6e-243 845.1 481 93.6
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 1.8e-239 832.4 471 93.6
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 6.9e-119 431.8 234 95.3
RcHm_v2.0_Chr5g0074641 Rosa chinensis HOM05D008702 ORTHO05D347722 2.5e-116 423.3 244 94.7
RcHm_v2.0_Chr7g0219701 Rosa chinensis HOM05D008702 ORTHO05D344573 4.4e-113 412.5 244 91.4
RcHm_v2.0_Chr5g0004311 Rosa chinensis HOM05D008702 ORTHO05D347493 2.8e-112 409.8 285 82.5
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 4.8e-96 355.9 186 95.2
RcHm_v2.0_Chr5g0076661 Rosa chinensis HOM05D008702 ORTHO05D340587 3.1e-95 353.2 203 93.6
RcHm_v2.0_Chr2g0142711 Rosa chinensis HOM05D008702 ORTHO05D344452 2.0e-94 350.5 195 96.4
RcHm_v2.0_Chr2g0138181 Rosa chinensis HOM05D008702 ORTHO05D342737 7.2e-92 342.0 203 91.1
RcHm_v2.0_Chr1g0323651 Rosa chinensis HOM05D008702 ORTHO05D003639 1.4e-90 337.8 187 92.5
RcHm_v2.0_Chr1g0320721 Rosa chinensis HOM05D008702 ORTHO05D345815 9.8e-89 331.6 203 89.2
RcHm_v2.0_Chr4g0419231 Rosa chinensis HOM05D008702 ORTHO05D003639 1.7e-85 320.9 219 78.1
RcHm_v2.0_Chr6g0263241 Rosa chinensis HOM05D008702 ORTHO05D003639 2.3e-69 267.3 142 100.0
RcHm_v2.0_Chr1g0321611 Rosa chinensis HOM05D008702 ORTHO05D340610 3.4e-65 253.4 148 92.6
RcHm_v2.0_Chr6g0249171 Rosa chinensis HOM05D008702 ORTHO05D003639 1.1e-63 248.4 142 93.7
RcHm_v2.0_Chr7g0238721 Rosa chinensis HOM05D008702 ORTHO05D003639 1.7e-61 241.1 133 97.0
RcHm_v2.0_Chr1g0321631 Rosa chinensis HOM05D008702 ORTHO05D003639 1.5e-60 238.0 120 95.0
RcHm_v2.0_Chr1g0320431 Rosa chinensis HOM05D008702 ORTHO05D003639 1.3e-53 214.9 112 93.8
RcHm_v2.0_Chr6g0263231 Rosa chinensis HOM05D008702 ORTHO05D341298 9.3e-39 165.6 86 97.7
RcHm_v2.0_Chr7g0234211 Rosa chinensis HOM05D008702 ORTHO05D347872 3.3e-28 130.6 74 95.9
RcHm_v2.0_Chr5g0038261 Rosa chinensis HOM05D008702 ORTHO05D003639 4.0e-26 123.6 95 71.6
RcHm_v2.0_Chr4g0401541 Rosa chinensis HOM05D008702 ORTHO05D003639 1.3e-24 118.6 72 90.3
RcHm_v2.0_Chr7g0238711 Rosa chinensis HOM05D008702 ORTHO05D345584 2.4e-10 71.2 35 94.3
RcHm_v2.0_Chr7g0234221 Rosa chinensis HOM05D008702 ORTHO05D341004 1.2e-09 68.9 35 94.3
RcHm_v2.0_Chr1g0321621 Rosa chinensis HOM05D008702 ORTHO05D003639 5.9e-09 66.6 31 96.8
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.9e-08 64.3 106 35.8
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 5.0e-08 63.5 106 35.8
FvH4_5g16044 Fragaria vesca HOM05D060084 ORTHO05D046536 2.5e-07 61.2 108 32.4
FAN18G2128 Fragaria x ananassa HOM05D060084 ORTHO05D046536 4.6e-06 57.0 88 34.1


User provided reference genes

Program Settings