Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0263091 Rosa chinensis HOM05D024028 ORTHO05D029452 2.0e-133 479.2 252 100.0
RcHm_v2.0_Chr6g0263111 Rosa chinensis HOM05D024028 ORTHO05D029452 5.6e-96 354.8 247 77.7
FAN24G1391 Fragaria x ananassa HOM05D024028 ORTHO05D029452 8.5e-76 287.7 225 72.9
RcHm_v2.0_Chr4g0395591 Rosa chinensis HOM05D001084 ORTHO05D020669 3.6e-18 96.3 203 35.0
RcHm_v2.0_Chr4g0419891 Rosa chinensis HOM05D001084 ORTHO05D020669 3.6e-18 96.3 203 35.0
RcHm_v2.0_Chr4g0420001 Rosa chinensis HOM05D001084 ORTHO05D020669 3.6e-18 96.3 203 35.0
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 4.7e-18 95.9 204 32.8
FvH4_2g08240 Fragaria vesca HOM05D024028 ORTHO05D029452 6.4e-15 85.5 73 67.1
Prupe.8G103700 Prunus persica HOM05D001084 ORTHO05D020669 6.4e-15 85.5 204 31.9
RcHm_v2.0_Chr6g0265941 Rosa chinensis HOM05D001084 ORTHO05D022670 4.6e-13 79.3 208 27.9
FvH4_7g31862 Fragaria vesca HOM05D001084 ORTHO05D020669 1.1e-11 74.7 204 30.4
FAN27G3112 Fragaria x ananassa HOM05D001084 ORTHO05D022670 1.5e-08 64.3 148 31.8
FAN24G1401 Fragaria x ananassa HOM05D001084 ORTHO05D022670 2.0e-08 63.9 182 32.4
Lalb_Chr05g0213001 Lupinus albus HOM05D001084 ORTHO05D001275 2.6e-08 63.5 208 27.4
FvH4_2g06181 Fragaria vesca HOM05D001084 ORTHO05D022670 4.9e-07 59.3 132 35.6
TAR628G1290 Trochodendron aralioides HOM05D001084 ORTHO05D001275 8.3e-07 58.5 204 30.4
VMungo1215G2091 Vigna mungo HOM05D001084 ORTHO05D001275 8.3e-07 58.5 208 26.4
Lalb_Chr09g0322661 Lupinus albus HOM05D001084 ORTHO05D001275 1.1e-06 58.2 208 26.4
PGR142G0474 Punica granatum HOM05D001084 ORTHO05D001275 1.1e-06 58.2 219 28.3
MELO3C012570.2 Cucumis melo HOM05D001084 ORTHO05D001275 1.4e-06 57.8 212 31.1
FvH4_2g08070 Fragaria vesca HOM05D001084 ORTHO05D029477 1.4e-06 57.8 203 28.1
CsaV3_7G023240 Cucumis sativus L. HOM05D001084 ORTHO05D001275 1.9e-06 57.4 212 31.1
ClCG02G005280 Citrullus lanatus HOM05D001084 ORTHO05D001275 2.4e-06 57.0 212 31.1
Psat2g162280 Pisum sativum HOM05D001084 ORTHO05D001275 3.2e-06 56.6 218 26.6
Glyma.11G063800 Glycine max HOM05D001084 ORTHO05D001275 4.1e-06 56.2 208 25.5
Medtr5g019430 Medicago truncatula HOM05D001084 ORTHO05D001275 4.1e-06 56.2 208 25.5
AL3G51980 Arabidopsis lyrata HOM05D001084 ORTHO05D001275 7.1e-06 55.5 208 29.3


User provided reference genes

Program Settings