Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0262731 Rosa chinensis HOM05D007608 ORTHO05D009451 6.5e-134 480.7 241 100.0
RcHm_v2.0_Chr6g0276491 Rosa chinensis HOM05D000017 ORTHO05D000013 4.2e-24 115.9 167 40.1
RcHm_v2.0_Chr6g0255261 Rosa chinensis HOM05D007608 ORTHO05D009451 6.7e-22 108.6 125 43.2
FAN05G0222 Fragaria x ananassa HOM05D009570 ORTHO05D009451 7.0e-19 98.6 182 35.2
FAN07G0760 Fragaria x ananassa HOM05D009570 ORTHO05D009451 5.0e-17 92.4 125 40.8
FvH4_6g31671 Fragaria vesca HOM05D009570 ORTHO05D009451 1.8e-14 84.0 253 34.4
FAN11G3226 Fragaria x ananassa HOM05D009570 ORTHO05D009451 2.3e-14 83.6 134 37.3
FvH4_5g20181 Fragaria vesca HOM05D000017 ORTHO05D009451 3.0e-14 83.2 150 34.7
FAN24G3217 Fragaria x ananassa HOM05D009570 ORTHO05D009451 5.2e-14 82.4 122 36.9
FvH4_5g30881 Fragaria vesca HOM05D009570 ORTHO05D009451 8.8e-14 81.6 122 36.9
FAN07G2625 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.2e-13 81.3 109 38.5
FAN18G3933 Fragaria x ananassa HOM05D007608 ORTHO05D009451 2.0e-13 80.5 253 27.7
FAN15G2659 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.7e-12 77.4 118 33.9
FvH4_6g37590 Fragaria vesca HOM05D007608 ORTHO05D009451 2.2e-12 77.0 137 35.0
FAN15G3547 Fragaria x ananassa HOM05D007608 ORTHO05D009451 6.3e-12 75.5 136 36.0
RcHm_v2.0_Chr5g0037941 Rosa chinensis HOM05D009570 ORTHO05D009451 1.1e-11 74.7 80 43.8
FvH4_7g09970 Fragaria vesca HOM05D000053 ORTHO05D009451 1.8e-11 73.9 149 30.9
FAN16G0808 Fragaria x ananassa HOM05D007608 ORTHO05D009451 2.4e-11 73.6 137 33.6
FAN16G1911 Fragaria x ananassa HOM05D007608 ORTHO05D009451 2.4e-11 73.6 137 33.6
FAN02G0464 Fragaria x ananassa HOM05D007608 ORTHO05D009451 3.1e-11 73.2 270 24.4
FAN07G1808 Fragaria x ananassa HOM05D007608 ORTHO05D009451 4.1e-11 72.8 118 32.2
FAN28G1258 Fragaria x ananassa HOM05D007608 ORTHO05D009451 7.0e-11 72.0 123 34.1
FAN24G0536 Fragaria x ananassa HOM05D007608 ORTHO05D009451 9.1e-11 71.6 254 24.8
FAN17G1626 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.2e-10 71.2 109 35.8
FvH4_6g38831 Fragaria vesca HOM05D007608 ORTHO05D009451 1.6e-10 70.9 106 34.9
FAN23G1083 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.6e-10 70.9 124 33.1
FAN02G0516 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.0e-09 68.2 109 35.8
FAN16G0611 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.0e-09 68.2 87 37.9
FvH4_6g23004 Fragaria vesca HOM05D028636 ORTHO05D009451 1.3e-09 67.8 94 34.0
FAN02G4289 Fragaria x ananassa HOM05D009570 ORTHO05D009451 1.1e-08 64.7 208 26.4
FAN25G1285 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.1e-08 64.7 86 37.2
FAN08G2560 Fragaria x ananassa HOM05D009570 ORTHO05D009451 1.5e-08 64.3 219 24.7
FAN15G0887 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.9e-08 63.9 102 35.3
FAN03G3089 Fragaria x ananassa HOM05D007608 ORTHO05D009451 9.4e-08 61.6 87 34.5
FAN21G3573 Fragaria x ananassa HOM05D007608 ORTHO05D009451 1.6e-07 60.8 108 33.3
FAN09G2409 Fragaria x ananassa HOM05D007608 ORTHO05D009451 3.6e-07 59.7 123 31.7
FAN24G1208 Fragaria x ananassa HOM05D007608 ORTHO05D009451 3.6e-07 59.7 94 33.0
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 6.8e-06 55.5 104 32.7
CSS0040604 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 6.8e-06 55.5 104 32.7


User provided reference genes

Program Settings