Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr0c38g0503081 Rosa chinensis HOM05D017226 ORTHO05D020714 1.3e-154 549.7 282 100.0
RcHm_v2.0_Chr6g0262581 Rosa chinensis HOM05D017226 ORTHO05D020714 1.3e-154 549.7 282 100.0
RcHm_v2.0_Chr0c38g0503051 Rosa chinensis HOM05D017226 ORTHO05D020714 6.9e-119 431.0 279 80.6
FAN24G0826 Fragaria x ananassa HOM05D017226 ORTHO05D020714 3.8e-101 372.1 281 73.3
FvH4_2g08090 Fragaria vesca HOM05D017226 ORTHO05D020714 3.2e-100 369.0 281 72.6
FAN15G3593 Fragaria x ananassa HOM05D017226 ORTHO05D020714 4.8e-96 355.1 281 70.1
RcHm_v2.0_Chr6g0262601 Rosa chinensis HOM05D017226 ORTHO05D020714 1.7e-77 293.5 173 85.5
RcHm_v2.0_Chr6g0262771 Rosa chinensis HOM05D017226 ORTHO05D347534 2.2e-40 170.2 106 83.0
Prupe.8G103700 Prunus persica HOM05D001084 ORTHO05D020669 5.1e-21 105.9 289 32.2
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 3.4e-17 93.2 242 31.8
FvH4_2g06181 Fragaria vesca HOM05D001084 ORTHO05D022670 3.5e-14 83.2 250 30.0
FAN24G1401 Fragaria x ananassa HOM05D001084 ORTHO05D022670 4.6e-14 82.8 264 28.8
Peaxi162Scf00016g00102 Petunia axillaris HOM05D001084 ORTHO05D001275 4.8e-11 72.8 266 28.6
Nitab4.5_0004280g0090 Nicotiana tabacum HOM05D001084 ORTHO05D001275 1.1e-10 71.6 294 26.5
Nitab4.5_0012349g0020 Nicotiana tabacum HOM05D001084 ORTHO05D001275 1.1e-10 71.6 294 26.5
FAN06G4360 Fragaria x ananassa HOM05D001084 ORTHO05D020669 2.2e-08 63.9 184 28.3
FvH4_7g31862 Fragaria vesca HOM05D001084 ORTHO05D020669 2.9e-08 63.5 184 28.3
Ca_12488_v3 Cicer arietinum L. HOM05D001084 ORTHO05D001275 5.0e-08 62.8 290 25.2
Ca_12493_v3 Cicer arietinum L. HOM05D001084 ORTHO05D001275 5.0e-08 62.8 290 25.2
TWI75G0560 Tripterygium wilfordii HOM05D001084 ORTHO05D001275 6.5e-08 62.4 276 26.4
Potri.004G150800 Populus trichocarpa HOM05D001084 ORTHO05D001275 8.4e-08 62.0 288 25.3
Sabra04G0100300 Salix brachista HOM05D001084 ORTHO05D001275 8.4e-08 62.0 289 26.0
Actinidia00499 Actinidia chinensis HOM05D001084 ORTHO05D001275 1.4e-07 61.2 278 25.5
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 4.2e-07 59.7 279 26.5
Sabra07G0027100 Salix brachista HOM05D001084 ORTHO05D001275 4.2e-07 59.7 260 24.6
Lj5P200T42 Lonicera japonica HOM05D001084 ORTHO05D001275 5.5e-07 59.3 289 25.6
CAN.G322.110 Capsicum annuum HOM05D001084 ORTHO05D001275 9.3e-07 58.5 279 25.4
Hma1.2p1_0652F.1_g195940 Hydrangea macrophylla HOM05D001084 ORTHO05D001275 9.3e-07 58.5 267 27.0
CDE02G2454 Ceratophyllum demersum HOM05D001084 ORTHO05D001275 1.2e-06 58.2 291 26.5
Dinv39946 Davidia involucrata HOM05D001084 ORTHO05D001275 1.6e-06 57.8 303 24.8
FvH4_2g08100 Fragaria vesca HOM05D001084 ORTHO05D022645 1.6e-06 57.8 201 30.3
RcHm_v2.0_Chr0c38g0503041 Rosa chinensis HOM05D001084 ORTHO05D022645 1.6e-06 57.8 214 27.6
Lsat_1_v5_gn_4_175700 Lactuca sativa HOM05D001084 ORTHO05D001275 2.7e-06 57.0 241 27.4
RcHm_v2.0_Chr6g0262781 Rosa chinensis HOM05D001084 ORTHO05D022645 2.7e-06 57.0 214 27.6
Solyc01g109380.3 Solanum lycopersicum HOM05D001084 ORTHO05D001275 2.7e-06 57.0 294 23.8
Migut.H00526 Erythranthe guttata HOM05D001084 ORTHO05D001275 3.5e-06 56.6 297 25.3
PGSC0003DMG400025185 Solanum tuberosum HOM05D001084 ORTHO05D001275 3.5e-06 56.6 267 25.1
Dinv26798 Davidia involucrata HOM05D001084 ORTHO05D001275 4.6e-06 56.2 299 25.8
FAN24G1400 Fragaria x ananassa HOM05D001084 ORTHO05D022645 4.6e-06 56.2 201 29.9
Sopen01g051570 Solanum pennellii HOM05D001084 ORTHO05D001275 4.6e-06 56.2 294 23.8
AUR62016703 Chenopodium quinoa HOM05D001084 ORTHO05D001275 6.1e-06 55.8 279 25.8
Cfa004264 Carpinus fangiana HOM05D001084 ORTHO05D001275 7.9e-06 55.5 284 26.1


User provided reference genes

Program Settings