Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0261741 Rosa chinensis HOM05D000005 ORTHO05D010497 1.5e-143 512.7 240 100.0
RcHm_v2.0_Chr6g0261191 Rosa chinensis HOM05D000005 ORTHO05D010497 2.7e-87 325.9 225 72.0
RcHm_v2.0_Chr6g0262851 Rosa chinensis HOM05D000005 ORTHO05D010497 3.9e-86 322.0 223 72.2
RcHm_v2.0_Chr6g0268391 Rosa chinensis HOM05D000005 ORTHO05D010497 1.5e-85 320.1 226 72.6
RcHm_v2.0_Chr6g0261451 Rosa chinensis HOM05D000005 ORTHO05D000012 1.9e-85 319.7 223 71.7
RcHm_v2.0_Chr6g0261281 Rosa chinensis HOM05D000005 ORTHO05D010497 2.8e-84 315.8 224 71.9
RcHm_v2.0_Chr6g0261701 Rosa chinensis HOM05D000005 ORTHO05D010497 1.7e-81 306.6 202 75.7
RcHm_v2.0_Chr6g0261091 Rosa chinensis HOM05D000005 ORTHO05D010497 2.9e-81 305.8 203 74.9
RcHm_v2.0_Chr6g0261901 Rosa chinensis HOM05D000005 ORTHO05D000012 8.3e-81 304.3 241 66.4
RcHm_v2.0_Chr6g0261971 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-80 303.9 220 70.5
FvH4_5g07310 Fragaria vesca HOM05D000005 ORTHO05D000012 1.2e-76 290.4 226 63.3
FAN08G0595 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.8e-75 286.6 226 61.9
FAN04G2061 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.0e-75 285.4 226 62.4
FAN13G3013 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.5e-74 283.5 226 61.9
RcHm_v2.0_Chr5g0059461 Rosa chinensis HOM05D000005 ORTHO05D010497 1.5e-74 283.5 213 66.7
RcHm_v2.0_Chr6g0267621 Rosa chinensis HOM05D000005 ORTHO05D000012 1.1e-72 277.3 198 69.7
RcHm_v2.0_Chr6g0262681 Rosa chinensis HOM05D000005 ORTHO05D010497 1.4e-72 276.9 204 68.1
RcHm_v2.0_Chr6g0261411 Rosa chinensis HOM05D000005 ORTHO05D010497 1.0e-70 270.8 203 68.5
RcHm_v2.0_Chr6g0265141 Rosa chinensis HOM05D000005 ORTHO05D010497 5.1e-70 268.5 202 68.8
FAN18G1249 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.7e-63 246.1 204 61.8
FAN13G1039 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.8e-60 236.1 205 62.4
FAN13G2851 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.2e-59 231.9 205 60.0
FAN13G2425 Fragaria x ananassa HOM05D000005 ORTHO05D010497 4.4e-58 228.8 204 60.8
FvH4_3g09291 Fragaria vesca HOM05D000005 ORTHO05D010497 3.8e-57 225.7 243 53.1
FAN08G0727 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.9e-56 223.4 203 59.1
FAN08G1537 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.2e-56 222.6 203 58.1
FAN04G2322 Fragaria x ananassa HOM05D000005 ORTHO05D010497 1.6e-55 220.3 204 59.3
FAN08G1474 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.6e-55 220.3 203 58.1
FAN11G1062 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.0e-55 218.4 210 59.5
FAN08G0141 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-54 216.9 204 58.8
FAN08G0091 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.8e-52 208.8 203 56.7
FAN04G0155 Fragaria x ananassa HOM05D000005 ORTHO05D010497 1.2e-50 204.1 203 56.2
FAN11G1260 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.2e-50 204.1 204 57.4
FvH4_5g03640 Fragaria vesca HOM05D000005 ORTHO05D010497 1.5e-50 203.8 200 55.5
RcHm_v2.0_Chr6g0267701 Rosa chinensis HOM05D000005 ORTHO05D010497 2.7e-47 193.0 120 78.3
FAN04G3033 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.3e-46 190.7 198 56.1
FAN08G1734 Fragaria x ananassa HOM05D000005 ORTHO05D010497 6.0e-39 165.2 227 44.1
FAN08G0517 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.4e-37 158.3 204 44.6
FvH4_5g39151 Fragaria vesca HOM05D000005 ORTHO05D000012 1.8e-35 153.7 215 42.8
FAN08G0146 Fragaria x ananassa HOM05D000005 ORTHO05D010497 3.1e-35 152.9 237 42.6
FvH4_5g39160 Fragaria vesca HOM05D000005 ORTHO05D000294 1.0e-33 147.9 223 40.8
FAN18G1764 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.9e-33 146.4 234 39.7
FvH4_1g15650 Fragaria vesca HOM05D000005 ORTHO05D000294 1.1e-32 144.4 217 40.6
FvH4_5g38870 Fragaria vesca HOM05D000005 ORTHO05D000012 3.4e-26 122.9 244 37.7
Prupe.8G110000 Prunus persica HOM05D000005 ORTHO05D010497 1.3e-25 120.9 212 39.2
Prupe.8G109000 Prunus persica HOM05D000005 ORTHO05D000012 3.2e-24 116.3 203 37.9
Prupe.8G110600 Prunus persica HOM05D000005 ORTHO05D000012 5.7e-21 105.5 200 37.5
FAN08G1990 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.4e-21 105.1 96 54.2
Prupe.8G109200 Prunus persica HOM05D000005 ORTHO05D000012 7.4e-21 105.1 199 33.7
Prupe.8G108500 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-20 104.0 195 34.9
Prupe.8G108800 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-20 104.0 195 34.9
Prupe.8G109500 Prunus persica HOM05D000005 ORTHO05D000012 4.8e-20 102.4 197 34.0
Prupe.8G111200 Prunus persica HOM05D000005 ORTHO05D000012 3.1e-19 99.8 253 33.2
Prupe.8G111500 Prunus persica HOM05D000005 ORTHO05D000012 2.0e-18 97.1 248 30.6
RcHm_v2.0_Chr6g0261351 Rosa chinensis HOM05D000005 ORTHO05D010497 4.5e-18 95.9 77 62.3
FAN16G0776 Fragaria x ananassa HOM05D000005 ORTHO05D010497 1.0e-17 94.7 72 69.4
Prupe.8G111100 Prunus persica HOM05D000005 ORTHO05D010497 1.3e-17 94.4 189 35.4
Prupe.8G112100 Prunus persica HOM05D000005 ORTHO05D000012 5.0e-17 92.4 239 33.1
RcHm_v2.0_Chr6g0262321 Rosa chinensis HOM05D000005 ORTHO05D010497 1.1e-16 91.3 195 33.3
Prupe.8G110800 Prunus persica HOM05D000005 ORTHO05D000012 4.2e-16 89.4 154 39.6
Prupe.2G045200 Prunus persica HOM05D000005 ORTHO05D000012 1.6e-15 87.4 200 36.5
RcHm_v2.0_Chr6g0265601 Rosa chinensis HOM05D000005 ORTHO05D010497 1.0e-14 84.7 194 32.5
Prupe.8G111900 Prunus persica HOM05D000005 ORTHO05D010497 1.4e-14 84.3 251 29.9
FAN15G2039 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.0e-14 83.2 228 31.6
Prupe.8G109600 Prunus persica HOM05D000005 ORTHO05D010497 1.1e-13 81.3 154 37.0
FAN08G2688 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.4e-13 78.6 78 48.7
Prupe.2G088500 Prunus persica HOM05D000005 ORTHO05D000012 9.7e-13 78.2 201 30.3
RcHm_v2.0_Chr6g0265631 Rosa chinensis HOM05D000005 ORTHO05D000012 1.3e-12 77.8 204 30.4
FvH4_5g33441 Fragaria vesca HOM05D000005 ORTHO05D010497 1.5e-10 70.9 207 30.0
RcHm_v2.0_Chr6g0260731 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-09 67.4 177 31.1
FvH4_3g44390 Fragaria vesca HOM05D000005 ORTHO05D000012 2.2e-09 67.0 206 29.6
FvH4_3g44370 Fragaria vesca HOM05D000005 ORTHO05D000012 5.0e-09 65.9 221 30.8
FAN11G1451 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.1e-08 64.7 203 30.0
RcHm_v2.0_Chr7g0225211 Rosa chinensis HOM05D000005 ORTHO05D020745 3.2e-08 63.2 211 28.9
FAN25G0053 Fragaria x ananassa HOM05D000005 ORTHO05D000012 4.2e-08 62.8 272 27.2
FAN15G0727 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.5e-08 62.4 226 22.6
Prupe.2G018300 Prunus persica HOM05D000005 ORTHO05D000012 3.6e-07 59.7 206 27.7
Prupe.2G055700 Prunus persica HOM05D000005 ORTHO05D000012 1.8e-06 57.4 171 28.1
Eucgr.L01333 Eucalyptus grandis HOM05D000005 ORTHO05D000012 5.2e-06 55.8 133 29.3
Eucgr.H02187 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.7e-06 55.5 112 33.9


User provided reference genes

Program Settings