Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0260711 Rosa chinensis HOM05D004625 ORTHO05D006054 1.6e-52 209.1 103 100.0
RcHm_v2.0_Chr6g0260791 Rosa chinensis HOM05D004625 ORTHO05D006054 2.7e-44 181.8 102 88.2
FAN24G2498 Fragaria x ananassa HOM05D004625 ORTHO05D006054 2.3e-32 142.1 105 73.3
FvH4_2g07370 Fragaria vesca HOM05D004625 ORTHO05D006054 4.0e-32 141.4 105 73.3
FAN15G2126 Fragaria x ananassa HOM05D004625 ORTHO05D006054 5.2e-32 141.0 105 72.4
RcHm_v2.0_Chr6g0260001 Rosa chinensis HOM05D004625 ORTHO05D006054 3.4e-31 138.3 91 80.2
FAN27G0869 Fragaria x ananassa HOM05D004625 ORTHO05D006054 1.9e-29 132.5 105 69.5
FAN20G2900 Fragaria x ananassa HOM05D004625 ORTHO05D006054 7.8e-28 127.1 105 65.7
Prupe.8G112500 Prunus persica HOM05D004625 ORTHO05D006054 2.1e-25 119.0 95 65.3
RcHm_v2.0_Chr6g0260231 Rosa chinensis HOM05D004625 ORTHO05D006054 2.0e-15 85.9 54 81.5
MD10G1086500 Malus domestica HOM05D004625 ORTHO05D006054 9.9e-15 83.6 96 53.1
CANSAT21G0857 Cannabis sativa HOM05D004625 ORTHO05D006054 1.3e-14 83.2 95 49.5
CANSAT25G0492 Cannabis sativa HOM05D004625 ORTHO05D006054 3.8e-14 81.6 95 48.4
Ciclev10027657m.g Citrus clementina HOM05D004625 ORTHO05D006054 2.7e-12 75.5 100 47.0
Manes.15G145800 Manihot esculenta HOM05D004625 ORTHO05D006054 4.3e-10 68.2 102 45.1
QL11p039255 Quercus lobata HOM05D004625 ORTHO05D006054 4.3e-10 68.2 99 42.4
TWI75G0995 Tripterygium wilfordii HOM05D004625 ORTHO05D006054 1.3e-09 66.6 102 44.1
Thecc.02G028700 Theobroma cacao HOM05D004625 ORTHO05D006054 2.1e-09 65.9 96 43.8
Hma1.2p1_1353F.1_g277680 Hydrangea macrophylla HOM05D004625 ORTHO05D006054 3.1e-08 62.0 99 44.4
TAR381G1538 Trochodendron aralioides HOM05D004625 ORTHO05D006054 4.0e-08 61.6 82 46.3
Cfa004948 Carpinus fangiana HOM05D004625 ORTHO05D006054 9.0e-08 60.5 88 43.2
Gohir.D01G172900 Gossypium hirsutum HOM05D004625 ORTHO05D006054 9.0e-08 60.5 101 40.6
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 9.9e-07 57.0 82 45.1
Gohir.A01G181800 Gossypium hirsutum HOM05D004625 ORTHO05D006054 1.7e-06 56.2 103 39.8
Potri.004G147800 Populus trichocarpa HOM05D004625 ORTHO05D006054 1.7e-06 56.2 82 43.9
Gorai.002G214500 Gossypium raimondii HOM05D004625 ORTHO05D006054 2.2e-06 55.8 103 39.8
Duzib052G1066 Durio zibethinus HOM05D004625 ORTHO05D006054 6.4e-06 54.3 79 44.3


User provided reference genes

Program Settings