Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 6.8e-268 926.8 480 100.0
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 6.0e-232 807.4 543 81.2
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 5.7e-222 774.2 536 78.5
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.8e-221 771.2 540 78.3
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.4e-220 768.8 543 77.7
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.1e-220 768.5 540 78.1
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.5e-219 764.6 542 77.3
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 4.2e-217 758.1 540 77.0
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.1e-216 755.7 557 75.2
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 2.7e-139 499.6 535 55.3
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 3.3e-129 466.1 528 51.7
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 3.3e-129 466.1 528 51.5
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 9.6e-129 464.5 528 52.5
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 3.1e-127 459.5 528 51.5
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 1.5e-126 457.2 533 50.1
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 6.5e-125 451.8 521 49.9
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.3e-122 444.1 537 48.2
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 3.9e-122 442.6 557 47.9
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 6.7e-122 441.8 532 47.0
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 1.9e-121 440.3 535 48.0
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 2.5e-121 439.9 534 47.2
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 7.4e-121 438.3 531 47.1
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 1.6e-120 437.2 536 46.8
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 2.8e-120 436.4 533 48.6
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 3.1e-119 433.0 525 48.8
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 4.1e-119 432.6 533 47.5
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 3.4e-118 429.5 533 47.8
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 3.4e-118 429.5 533 47.8
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 8.4e-117 424.9 545 47.2
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 2.5e-116 423.3 531 45.6
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 4.2e-116 422.5 555 44.9
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 2.7e-115 419.9 534 46.1
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.0e-114 417.9 532 46.2
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 5.3e-111 405.6 535 45.4
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 2.0e-110 403.7 515 45.6
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.9e-110 402.1 539 44.7
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 7.7e-110 401.7 536 45.0
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 1.7e-109 400.6 534 45.1
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 2.2e-109 400.2 536 45.0
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 1.4e-108 397.5 529 45.9
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 9.4e-108 394.8 527 46.5
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 1.2e-107 394.4 537 43.6
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 4.6e-107 392.5 518 45.6
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 6.1e-107 392.1 535 43.6
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 2.5e-105 386.7 533 43.2
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 3.3e-105 386.3 564 42.2
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 7.4e-105 385.2 534 43.6
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.3e-104 384.4 548 43.2
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 2.4e-103 380.2 536 43.8
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 6.9e-103 378.6 483 46.6
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 2.0e-102 377.1 610 39.8
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 1.7e-101 374.0 534 44.4
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 3.2e-100 369.8 535 43.7
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 9.4e-100 368.2 534 41.6
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 1.2e-99 367.9 531 42.4
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 2.1e-99 367.1 531 43.5
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.3e-98 363.6 533 41.8
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 3.0e-98 363.2 529 42.2
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 8.8e-98 361.7 535 42.6
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.1e-97 361.3 526 42.6
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 7.4e-97 358.6 532 43.6
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 4.8e-96 355.9 506 43.5
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 1.4e-95 354.4 537 40.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.8e-95 354.0 540 40.2
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 1.3e-93 347.8 541 40.5
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 2.9e-93 346.7 529 42.3
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 3.8e-93 346.3 435 46.9
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 6.5e-93 345.5 532 41.5
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 1.5e-92 344.4 532 41.4
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 7.2e-92 342.0 560 40.7
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 1.2e-91 341.3 480 44.4
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 1.2e-91 341.3 532 41.2
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 4.7e-91 339.3 538 40.0
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 8.0e-91 338.6 532 40.6
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.4e-90 337.8 539 39.9
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 8.8e-90 335.1 534 40.6
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 1.1e-89 334.7 540 39.1
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.0e-89 334.0 539 39.7
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 3.3e-89 333.2 537 40.8
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 9.7e-89 331.6 546 39.0
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 9.7e-89 331.6 540 41.1
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 1.7e-88 330.9 532 40.4
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 3.7e-88 329.7 539 39.0
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.4e-87 327.8 539 40.6
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 1.4e-87 327.8 529 39.1
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 1.8e-87 327.4 438 45.9
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 1.8e-87 327.4 533 38.5
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 9.1e-87 325.1 529 39.5
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.2e-86 324.7 539 39.0
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 1.6e-86 324.3 539 38.6
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 1.6e-86 324.3 539 38.6
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 2.0e-86 323.9 539 38.6
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 2.7e-86 323.6 539 38.6
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 8.5e-85 318.5 503 40.4
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 1.9e-84 317.4 523 38.2
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 1.6e-83 314.3 541 38.1
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 3.6e-83 313.2 538 38.1
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 3.6e-83 313.2 540 38.0
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 4.7e-83 312.8 539 37.5
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 5.2e-82 309.3 552 38.8
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 2.6e-81 307.0 416 43.5
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 1.3e-80 304.7 537 38.5
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 1.8e-79 300.8 529 39.3
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 5.5e-76 289.3 386 44.6
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 7.2e-76 288.9 681 33.6
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 1.2e-75 288.1 543 38.9
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 3.0e-74 283.5 520 36.9
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 2.0e-73 280.8 386 44.6
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 2.5e-68 263.8 545 34.9
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 2.1e-67 260.8 566 36.0
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 4.7e-67 259.6 528 35.4
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 3.0e-66 256.9 574 32.9
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.2e-66 256.1 455 38.2
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 1.3e-64 251.5 558 33.2
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 7.0e-63 245.7 550 32.5
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 1.9e-60 237.7 335 42.4
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 3.4e-57 226.9 530 34.2
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 4.1e-55 219.9 415 37.8
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 2.0e-54 217.6 339 41.0
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 1.2e-51 208.4 279 46.2
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 8.1e-51 205.7 282 46.8
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 3.7e-48 196.8 479 32.4
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.5e-44 184.9 353 36.8
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 1.6e-43 181.4 329 37.1
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 2.6e-41 174.1 206 51.5
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 7.3e-36 156.0 447 29.8
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 2.6e-33 147.5 273 36.3
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 7.6e-33 146.0 143 50.3
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.9e-31 141.4 176 43.8
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 3.2e-31 140.6 255 36.9
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.5e-28 131.7 144 47.2
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.9e-28 131.3 185 46.5
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 2.5e-28 131.0 174 43.7
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 2.1e-27 127.9 300 35.3
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 1.1e-26 125.6 201 39.3
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 1.8e-26 124.8 157 41.4
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 3.1e-26 124.0 157 42.0
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 5.3e-26 123.2 150 45.3
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 5.8e-25 119.8 152 41.4
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 3.2e-23 114.0 174 40.2
RcHm_v2.0_Chr1g0346601 Rosa chinensis HOM05D004671 ORTHO05D005638 1.5e-20 105.1 60 93.3
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 1.9e-20 104.8 476 26.1
RcHm_v2.0_Chr2g0108991 Rosa chinensis HOM05D004671 ORTHO05D005638 1.1e-18 99.0 60 90.0
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 2.2e-16 91.3 249 30.1
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 3.2e-15 87.4 188 30.9
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 2.1e-14 84.7 132 34.1
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 5.1e-13 80.1 174 31.6
HanXRQChr06g0163721 Helianthus annuus HOM05D004671 ORTHO05D005638 7.6e-09 66.2 92 50.0
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 9.3e-07 59.3 188 23.9


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