Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0254991 Rosa chinensis HOM05D060373 ORTHO05D035063 1.1e-43 179.5 84 100.0
RcHm_v2.0_Chr7g0224921 Rosa chinensis HOM05D060373 ORTHO05D035063 3.0e-33 144.8 69 92.8
RcHm_v2.0_Chr6g0286581 Rosa chinensis HOM05D002740 ORTHO05D003126 2.9e-12 75.1 43 81.4
FvH4_2g20480 Fragaria vesca HOM05D002740 ORTHO05D003126 1.0e-09 66.6 43 74.4
FAN15G0236 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.0e-09 66.6 43 74.4
FAN24G0357 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.0e-09 66.6 43 74.4
FAN27G2178 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.0e-09 66.6 43 74.4
Prupe.8G215100 Prunus persica HOM05D002740 ORTHO05D003126 2.8e-07 58.5 37 70.3
Haze_24709 Corylus avellana HOM05D002740 ORTHO05D003126 1.4e-06 56.2 45 60.0
GSVIVG01028433001 Vitis vinifera HOM05D002740 ORTHO05D003126 1.4e-06 56.2 43 60.5
Ciclev10023610m.g Citrus clementina HOM05D002740 ORTHO05D003126 2.4e-06 55.5 41 63.4
Cpa.g.sc87.32 Carica papaya HOM05D002740 ORTHO05D003126 3.1e-06 55.1 42 64.3
CSS0008677 Camellia sinensis var. sinensis HOM05D002740 ORTHO05D003126 4.0e-06 54.7 38 65.8
Cfa002487 Carpinus fangiana HOM05D002740 ORTHO05D003126 5.2e-06 54.3 41 63.4
Manes.13G039600 Manihot esculenta HOM05D002740 ORTHO05D003126 9.0e-06 53.5 42 57.1


User provided reference genes

Program Settings