Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0254371 Rosa chinensis HOM05D003561 ORTHO05D004351 4.0e-276 954.1 475 100.0
RcHm_v2.0_Chr6g0254331 Rosa chinensis HOM05D003561 ORTHO05D004351 7.6e-227 790.4 486 84.4
FAN24G1860 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.6e-213 746.1 486 79.6
FAN27G2112 Fragaria x ananassa HOM05D003561 ORTHO05D004351 8.1e-213 743.8 486 79.2
FAN15G0682 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.6e-211 738.8 486 79.0
FvH4_2g04670 Fragaria vesca HOM05D003561 ORTHO05D004351 2.9e-210 735.3 486 78.6
RcHm_v2.0_Chr6g0254291 Rosa chinensis HOM05D003561 ORTHO05D004351 7.6e-203 710.7 392 91.8
Prupe.8G138700 Prunus persica HOM05D003561 ORTHO05D004351 1.3e-199 699.9 488 74.6
FAN20G0240 Fragaria x ananassa HOM05D003561 ORTHO05D004351 8.5e-194 680.6 491 73.3
MD05G1093800 Malus domestica HOM05D003561 ORTHO05D004351 9.3e-193 677.2 481 73.2
Potri.009G092500 Populus trichocarpa HOM05D003561 ORTHO05D004351 4.4e-174 615.1 487 64.9
Cfa004615 Carpinus fangiana HOM05D003561 ORTHO05D004351 1.7e-173 613.2 489 66.7
Haze_10212 Corylus avellana HOM05D003561 ORTHO05D004351 6.3e-173 611.3 497 65.8
CiPaw.05G014100 Carya illinoinensis HOM05D003561 ORTHO05D004351 9.1e-172 607.4 489 66.1
Sabra09G0071200 Salix brachista HOM05D003561 ORTHO05D004351 2.0e-171 606.3 477 65.0
Atru.chr5.2428 Acer truncatum HOM05D003561 ORTHO05D004351 1.7e-170 603.2 487 65.3
QL11p032306 Quercus lobata HOM05D003561 ORTHO05D004351 3.8e-170 602.1 488 66.2
Thecc.02G112400 Theobroma cacao HOM05D003561 ORTHO05D004351 3.2e-169 599.0 387 76.2
Manes.10G073266 Manihot esculenta HOM05D003561 ORTHO05D004351 1.4e-167 593.6 487 63.7
Ciclev10027851m.g Citrus clementina HOM05D003561 ORTHO05D004351 3.0e-167 592.4 483 64.6
Duzib132G1062 Durio zibethinus HOM05D003561 ORTHO05D004351 4.0e-167 592.0 387 74.7
GSVIVG01037885001 Vitis vinifera HOM05D003561 ORTHO05D004351 3.3e-166 589.0 484 64.3
Dinv15779 Davidia involucrata HOM05D003561 ORTHO05D004351 5.7e-166 588.2 387 74.7
Potri.001G297600 Populus trichocarpa HOM05D003561 ORTHO05D004351 1.1e-164 583.9 487 62.6
COL.COLO4_32560 Corchorus olitorius HOM05D003561 ORTHO05D004351 4.1e-164 582.0 389 73.5
Actinidia27978 Actinidia chinensis HOM05D003561 ORTHO05D004351 5.3e-164 581.6 387 74.2
Lj5g0023418 Lotus japonicus HOM05D003561 ORTHO05D004351 2.2e-162 576.2 387 74.9
Psat6g216560 Pisum sativum HOM05D003561 ORTHO05D004351 3.8e-162 575.5 468 65.2
Phvul.007G042500 Phaseolus vulgaris HOM05D003561 ORTHO05D004351 6.5e-162 574.7 480 65.0
CSS0023905 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.1e-161 573.9 485 63.1
Solyc01g107360.4 Solanum lycopersicum HOM05D003561 ORTHO05D004351 4.2e-161 572.0 387 73.4
vmacro19460 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 4.2e-161 572.0 387 74.2
PGSC0003DMG400025758 Solanum tuberosum HOM05D003561 ORTHO05D004351 7.2e-161 571.2 486 63.0
arahy.Tifrunner.gnm1.ann1.IMHW03 Arachis hypogaea HOM05D003561 ORTHO05D004351 1.2e-160 570.5 387 73.9
Migut.B00411 Erythranthe guttata HOM05D003561 ORTHO05D004351 1.6e-160 570.1 387 72.6
arahy.Tifrunner.gnm1.ann1.Q24X8K Arachis hypogaea HOM05D003561 ORTHO05D004351 2.1e-160 569.7 387 73.9
Sopen01g049600 Solanum pennellii HOM05D003561 ORTHO05D004351 2.1e-160 569.7 486 62.8
Glyma.10G259600 Glycine max HOM05D003561 ORTHO05D004351 2.7e-160 569.3 387 74.7
SalBow6G0742 Salvia bowleyana HOM05D003561 ORTHO05D004351 3.6e-160 568.9 387 73.4
SalBow6G5634 Salvia bowleyana HOM05D003561 ORTHO05D004351 3.6e-160 568.9 387 73.4
VMungo0720G2973 Vigna mungo HOM05D003561 ORTHO05D004351 3.6e-160 568.9 429 69.9
Glyma.20G131200 Glycine max HOM05D003561 ORTHO05D004351 4.7e-160 568.5 387 74.9
Medtr1g106905 Medicago truncatula HOM05D003561 ORTHO05D004351 4.7e-160 568.5 427 68.4
TAR381G0090 Trochodendron aralioides HOM05D003561 ORTHO05D004351 6.1e-160 568.2 491 61.1
TPR.G27110 Trifolium pratense HOM05D003561 ORTHO05D004351 1.0e-159 567.4 387 73.1
Rhsim05G0089400 Rhododendron simsii HOM05D003561 ORTHO05D004351 4.0e-159 565.5 387 73.1
Ca_11052_v3 Cicer arietinum L. HOM05D003561 ORTHO05D004351 5.2e-159 565.1 389 73.5
Rhsim10G0161700 Rhododendron simsii HOM05D003561 ORTHO05D004351 5.2e-159 565.1 387 73.1
Nitab4.5_0001480g0050 Nicotiana tabacum HOM05D003561 ORTHO05D004351 8.8e-159 564.3 484 61.6
Gohir.A03G184800 Gossypium hirsutum HOM05D003561 ORTHO05D004351 2.0e-158 563.1 387 71.6
Cc02_g19520 Coffea canephora HOM05D003561 ORTHO05D004351 3.4e-158 562.4 387 72.6
Nitab4.5_0010275g0030 Nicotiana tabacum HOM05D003561 ORTHO05D004351 3.4e-158 562.4 484 61.4
Gorai.005G233700 Gossypium raimondii HOM05D003561 ORTHO05D004351 2.8e-157 559.3 387 71.1
Peaxi162Scf00016g02531 Petunia axillaris HOM05D003561 ORTHO05D004351 2.8e-157 559.3 427 66.0
MSTRG.16699 Avicennia marina HOM05D003561 ORTHO05D004351 4.8e-157 558.5 387 71.6
Nn5g30480 Nelumbo nucifera HOM05D003561 ORTHO05D004351 4.1e-156 555.4 491 59.7
Gohir.D02G206300 Gossypium hirsutum HOM05D003561 ORTHO05D004351 7.0e-156 554.7 387 70.5
Eucgr.G01293 Eucalyptus grandis HOM05D003561 ORTHO05D004351 3.5e-155 552.4 485 59.8
TWI75G1561 Tripterygium wilfordii HOM05D003561 ORTHO05D004351 2.2e-154 549.7 387 72.1
Lalb_Chr02g0145171 Lupinus albus HOM05D003561 ORTHO05D004351 2.9e-154 549.3 481 61.5
Lj5A216G104 Lonicera japonica HOM05D003561 ORTHO05D004351 8.5e-154 547.7 403 70.5
Oeu011151.1 Olea europaea HOM05D003561 ORTHO05D004351 8.5e-154 547.7 480 61.0
Hund06710 Selenicereus undatus HOM05D003561 ORTHO05D004351 7.2e-153 544.7 387 69.0
SGA_v2.0_scaffold225G43001 Striga asiatica HOM05D003561 ORTHO05D004351 7.2e-153 544.7 477 61.0
COL.COLO4_11519 Corchorus olitorius HOM05D003561 ORTHO05D004351 6.1e-152 541.6 389 67.6
PGR042G0884 Punica granatum HOM05D003561 ORTHO05D004351 1.8e-151 540.0 489 58.5
Duzib147G0573 Durio zibethinus HOM05D003561 ORTHO05D004351 5.7e-150 535.0 390 65.6
CiPaw.01G008500 Carya illinoinensis HOM05D003561 ORTHO05D004351 6.3e-149 531.6 388 67.0
Thecc.01G067200 Theobroma cacao HOM05D003561 ORTHO05D004351 3.1e-148 529.3 388 66.8
Lsat_1_v5_gn_7_85901 Lactuca sativa HOM05D003561 ORTHO05D004351 7.0e-148 528.1 391 68.5
Cfa004087 Carpinus fangiana HOM05D003561 ORTHO05D004351 1.2e-147 527.3 431 62.6
Gohir.D03G026700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 1.6e-147 526.9 388 67.0
Haze_15327 Corylus avellana HOM05D003561 ORTHO05D004351 2.7e-147 526.2 447 61.3
ECA236G4994 Erigeron canadensis HOM05D003561 ORTHO05D004351 2.7e-147 526.2 389 68.6
Gorai.003G028400 Gossypium raimondii HOM05D003561 ORTHO05D004351 2.7e-147 526.2 388 67.0
CSS0044154 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 3.5e-147 525.8 388 67.3
AUR62027366 Chenopodium quinoa HOM05D003561 ORTHO05D004351 4.5e-147 525.4 387 66.4
Gohir.A02G153700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 1.0e-146 524.2 388 67.0
HanXRQChr04g0128551 Helianthus annuus HOM05D003561 ORTHO05D004351 2.3e-146 523.1 427 64.2
AUR62031283 Chenopodium quinoa HOM05D003561 ORTHO05D004351 3.8e-146 522.3 387 65.9
Ciclev10024935m.g Citrus clementina HOM05D003561 ORTHO05D004351 6.6e-146 521.5 388 65.7
Aqoxy6G02799 Aquilegia oxysepala HOM05D003561 ORTHO05D004351 1.9e-145 520.0 389 68.1
Actinidia12002 Actinidia chinensis HOM05D003561 ORTHO05D004351 7.3e-145 518.1 387 66.4
Prupe.6G225400 Prunus persica HOM05D003561 ORTHO05D004351 1.6e-144 516.9 387 66.1
Atru.chr3.226 Acer truncatum HOM05D003561 ORTHO05D004351 6.1e-144 515.0 432 60.4
Manes.13G115200 Manihot esculenta HOM05D003561 ORTHO05D004351 1.0e-143 514.2 389 66.3
Ah.09g232050 Amaranthus hybridus HOM05D003561 ORTHO05D004351 1.4e-143 513.8 387 65.1
PSO675G3219 Papaver somniferum HOM05D003561 ORTHO05D004351 1.4e-143 513.8 392 66.3
Aa31sc72G40 Aethionema arabicum HOM05D003561 ORTHO05D004351 1.8e-143 513.5 388 67.0
Potri.007G051500 Populus trichocarpa HOM05D003561 ORTHO05D004351 2.3e-143 513.1 389 66.6
PSO541G3211 Papaver somniferum HOM05D003561 ORTHO05D004351 4.0e-143 512.3 392 66.1
RcHm_v2.0_Chr2g0107231 Rosa chinensis HOM05D003561 ORTHO05D004351 6.8e-143 511.5 388 64.7
A01p04120 Brassica napus HOM05D003561 ORTHO05D004351 2.6e-142 509.6 389 67.1
BraA01t00401Z Brassica rapa HOM05D003561 ORTHO05D004351 1.7e-141 506.9 389 66.6
GSVIVG01000167001 Vitis vinifera HOM05D003561 ORTHO05D004351 2.9e-141 506.1 389 67.4
MD02G1180800 Malus domestica HOM05D003561 ORTHO05D004351 6.4e-141 505.0 390 65.4
Thhalv10024491m.g Eutrema salsugineum HOM05D003561 ORTHO05D004351 1.8e-140 503.4 389 66.1
FAN26G2049 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.4e-140 503.1 391 64.5
FAN28G0575 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.2e-140 502.7 411 61.8
FAN19G0232 Fragaria x ananassa HOM05D003561 ORTHO05D004351 5.4e-140 501.9 388 64.2
FvH4_1g17060 Fragaria vesca HOM05D003561 ORTHO05D004351 2.7e-139 499.6 388 63.7
BcaNung04991 Brassica carinata HOM05D003561 ORTHO05D004351 4.6e-139 498.8 389 65.6
CANSAT01G2799 Cannabis sativa HOM05D003561 ORTHO05D004351 1.0e-138 497.7 390 64.1
CARHR242490 Cardamine hirsuta HOM05D003561 ORTHO05D004351 1.3e-138 497.3 390 64.6
C01p04490 Brassica napus HOM05D003561 ORTHO05D004351 3.0e-138 496.1 389 65.0
BolC1t00435H Brassica oleracea HOM05D003561 ORTHO05D004351 3.0e-138 496.1 389 65.0
DCAR_010841 Daucus carota HOM05D003561 ORTHO05D004351 5.6e-137 491.9 389 62.5
AL7G16990 Arabidopsis lyrata HOM05D003561 ORTHO05D004351 8.0e-136 488.0 391 64.7
Carub.0007s0608 Capsella rubella HOM05D003561 ORTHO05D004351 8.0e-136 488.0 390 65.4
THA.LOC104819541 Tarenaya hassleriana HOM05D003561 ORTHO05D004351 8.0e-136 488.0 387 63.8
Atru.chr3.215 Acer truncatum HOM05D003561 ORTHO05D004351 2.3e-135 486.5 362 66.0
Cpa.g.sc292.9 Carica papaya HOM05D003561 ORTHO05D004351 3.1e-135 486.1 424 61.1
Rhsim10G0104800 Rhododendron simsii HOM05D003561 ORTHO05D004351 3.1e-135 486.1 388 62.1
Lj7C86G5 Lonicera japonica HOM05D003561 ORTHO05D004351 1.5e-134 483.8 387 63.6
AUR62003959 Chenopodium quinoa HOM05D003561 ORTHO05D004351 3.4e-134 482.6 387 62.3
PGR102G2010 Punica granatum HOM05D003561 ORTHO05D004351 5.8e-134 481.9 389 62.7
Hma1.2p1_0239F.1_g099850 Hydrangea macrophylla HOM05D003561 ORTHO05D004351 1.7e-133 480.3 389 62.5
Eucgr.H02268 Eucalyptus grandis HOM05D003561 ORTHO05D004351 1.1e-132 477.6 388 61.6
Lsat_1_v5_gn_2_83541 Lactuca sativa HOM05D003561 ORTHO05D004351 1.4e-132 477.2 395 61.0
HanXRQChr14g0449611 Helianthus annuus HOM05D003561 ORTHO05D004351 3.2e-132 476.1 392 62.2
ECA238G3157 Erigeron canadensis HOM05D003561 ORTHO05D004351 9.2e-132 474.6 394 61.7
Hund13924 Selenicereus undatus HOM05D003561 ORTHO05D004351 1.2e-131 474.2 402 58.7
Solyc02g064800.3 Solanum lycopersicum HOM05D003561 ORTHO05D004351 1.2e-131 474.2 388 61.6
Cc07_g06660 Coffea canephora HOM05D003561 ORTHO05D004351 1.6e-131 473.8 391 61.1
Sopen02g014910 Solanum pennellii HOM05D003561 ORTHO05D004351 1.6e-131 473.8 388 61.3
CAN.G1482.2 Capsicum annuum HOM05D003561 ORTHO05D004351 4.6e-131 472.2 388 61.6
PGSC0003DMG400013016 Solanum tuberosum HOM05D003561 ORTHO05D004351 1.0e-130 471.1 390 61.0
Hund29372 Selenicereus undatus HOM05D003561 ORTHO05D004351 2.3e-130 469.9 435 56.3
Hund29375 Selenicereus undatus HOM05D003561 ORTHO05D004351 2.3e-130 469.9 435 56.3
Ah.03g146260 Amaranthus hybridus HOM05D003561 ORTHO05D004351 5.0e-130 468.8 389 60.4
Peaxi162Scf00449g00016 Petunia axillaris HOM05D003561 ORTHO05D004351 4.3e-129 465.7 388 60.3
Sp7g32080 Schrenkiella parvula HOM05D003561 ORTHO05D004351 4.3e-129 465.7 387 63.0
Nitab4.5_0000284g0010 Nicotiana tabacum HOM05D003561 ORTHO05D004351 9.5e-129 464.5 388 60.8
Rhsim10G0162500 Rhododendron simsii HOM05D003561 ORTHO05D004351 9.5e-129 464.5 387 63.8
Nitab4.5_0000604g0020 Nicotiana tabacum HOM05D003561 ORTHO05D004351 2.8e-128 463.0 429 56.4
AT4G34280 Arabidopsis thaliana HOM05D003561 ORTHO05D004351 4.4e-126 455.7 390 62.1
DCAR_001664 Daucus carota HOM05D003561 ORTHO05D004351 3.2e-124 449.5 323 69.3
SEGI_28319 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 3.2e-124 449.5 394 56.6
SEGI_36307 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 3.2e-124 449.5 394 56.6
Oeu003572.1 Olea europaea HOM05D003561 ORTHO05D004351 1.6e-123 447.2 391 58.6
CSS0037584 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 6.0e-123 445.3 430 57.7
SGA_v2.0_scaffold143G35782 Striga asiatica HOM05D003561 ORTHO05D004351 1.9e-121 440.3 369 61.5
SalBow1G5992 Salvia bowleyana HOM05D003561 ORTHO05D004351 1.5e-118 430.6 383 58.2
BcaNung04160 Brassica carinata HOM05D003561 ORTHO05D004351 7.6e-118 428.3 373 60.9
AagrBONN_evm.TU.Sc2ySwM_111.1 Anthoceros agrestis HOM05D003561 ORTHO05D004351 9.9e-118 427.9 412 53.4
AUR62038271 Chenopodium quinoa HOM05D003561 ORTHO05D004351 2.9e-117 426.4 387 56.6
Rhsim10G0161500 Rhododendron simsii HOM05D003561 ORTHO05D004351 7.8e-115 418.3 276 75.4
Pp3c18_4410 Physcomitrium patens HOM05D003561 ORTHO05D004351 1.7e-114 417.2 454 47.4
Pp3c22_17660 Physcomitrium patens HOM05D003561 ORTHO05D004351 2.8e-112 409.8 421 50.4
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 2.3e-106 390.2 257 72.4
vmacro05379 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 4.8e-104 382.5 328 59.5
Dinv30056 Davidia involucrata HOM05D003561 ORTHO05D004351 1.2e-102 377.9 385 52.7
EL10Ac6g15669 Beta vulgaris HOM05D003561 ORTHO05D004351 1.2e-99 367.9 328 55.8
SMO145G0124 Selaginella moellendorffii HOM05D003561 ORTHO05D004351 1.6e-99 367.5 388 48.2
PRCOL_00006635 Prasinoderma coloniale HOM05D003561 ORTHO05D004351 2.7e-99 366.7 419 48.4
Rhsim05G0089000 Rhododendron simsii HOM05D003561 ORTHO05D000355 8.2e-72 275.4 385 43.1
Migut.H00379 Erythranthe guttata HOM05D003561 ORTHO05D004351 6.9e-71 272.3 206 64.6
PGSC0003DMG400026677 Solanum tuberosum HOM05D003561 ORTHO05D004351 5.9e-70 269.2 214 62.6
AagrBONN_evm.TU.Sc2ySwM_340.381 Anthoceros agrestis HOM05D003561 ORTHO05D004351 2.3e-66 257.3 273 51.3
Oeu027122.1 Olea europaea HOM05D003561 ORTHO05D004351 4.0e-50 203.4 123 74.0
CSS0044953 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.0e-42 178.7 156 57.7
BcaNung04992 Brassica carinata HOM05D003561 ORTHO05D004351 5.5e-36 156.4 84 85.7
Rhsim10G0161900 Rhododendron simsii HOM05D003561 ORTHO05D000355 1.0e-34 152.1 142 57.0
Sc07g0000630 Simmondsia chinensis HOM05D003561 ORTHO05D004351 1.7e-29 134.8 112 61.6
Cpa.g.sc3364.1 Carica papaya HOM05D003561 ORTHO05D004351 1.1e-28 132.1 65 93.8
QL11p032339 Quercus lobata HOM05D003561 ORTHO05D004351 2.3e-21 107.8 71 77.5
Sc07g0000620 Simmondsia chinensis HOM05D003561 ORTHO05D004351 6.8e-18 96.3 100 51.0
DCAR_017864 Daucus carota HOM05D003561 ORTHO05D004351 8.6e-13 79.3 46 82.6
Solyc01g067990.1 Solanum lycopersicum HOM05D003561 ORTHO05D004351 6.2e-11 73.2 152 34.2
Lj9A35G21 Lonicera japonica HOM05D003561 ORTHO05D234523 2.7e-06 57.8 36 75.0


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