Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0254361 Rosa chinensis HOM05D003561 ORTHO05D004351 9.9e-80 300.1 152 100.0
RcHm_v2.0_Chr6g0254331 Rosa chinensis HOM05D003561 ORTHO05D004351 8.7e-76 287.0 149 97.3
FvH4_2g04670 Fragaria vesca HOM05D003561 ORTHO05D004351 1.5e-72 276.2 149 92.6
FAN24G1860 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.5e-72 276.2 149 92.6
FAN15G0682 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.6e-72 275.4 149 91.9
FAN27G2112 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.7e-71 272.7 149 91.9
MD05G1093800 Malus domestica HOM05D003561 ORTHO05D004351 2.1e-66 255.8 149 85.9
Cfa004615 Carpinus fangiana HOM05D003561 ORTHO05D004351 1.3e-58 229.9 149 78.5
Haze_10212 Corylus avellana HOM05D003561 ORTHO05D004351 2.2e-58 229.2 149 78.5
GSVIVG01037885001 Vitis vinifera HOM05D003561 ORTHO05D004351 3.7e-58 228.4 149 75.2
Potri.009G092500 Populus trichocarpa HOM05D003561 ORTHO05D004351 4.8e-58 228.0 149 75.8
Manes.10G073266 Manihot esculenta HOM05D003561 ORTHO05D004351 8.2e-58 227.3 149 75.8
Dinv15779 Davidia involucrata HOM05D003561 ORTHO05D004351 2.4e-57 225.7 149 75.2
Sabra09G0071200 Salix brachista HOM05D003561 ORTHO05D004351 2.4e-57 225.7 149 73.8
QL11p032306 Quercus lobata HOM05D003561 ORTHO05D004351 3.1e-57 225.3 149 76.5
Lalb_Chr02g0145171 Lupinus albus HOM05D003561 ORTHO05D004351 1.5e-56 223.0 149 73.2
arahy.Tifrunner.gnm1.ann1.Q24X8K Arachis hypogaea HOM05D003561 ORTHO05D004351 3.4e-56 221.9 149 71.8
RcHm_v2.0_Chr6g0254281 Rosa chinensis HOM05D003561 ORTHO05D004351 3.4e-56 221.9 117 96.6
arahy.Tifrunner.gnm1.ann1.IMHW03 Arachis hypogaea HOM05D003561 ORTHO05D004351 4.5e-56 221.5 149 71.8
Ca_11052_v3 Cicer arietinum L. HOM05D003561 ORTHO05D004351 4.5e-56 221.5 149 73.2
Potri.001G297600 Populus trichocarpa HOM05D003561 ORTHO05D004351 1.0e-55 220.3 149 72.5
Phvul.007G042500 Phaseolus vulgaris HOM05D003561 ORTHO05D004351 3.8e-55 218.4 149 73.2
Lj5A216G104 Lonicera japonica HOM05D003561 ORTHO05D004351 6.5e-55 217.6 149 72.5
CSS0023905 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.1e-54 216.9 149 70.5
CSS0037584 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.1e-54 216.9 149 70.5
Duzib132G1062 Durio zibethinus HOM05D003561 ORTHO05D004351 2.5e-54 215.7 149 71.8
Lj5g0023418 Lotus japonicus HOM05D003561 ORTHO05D004351 3.2e-54 215.3 149 71.8
TAR381G0090 Trochodendron aralioides HOM05D003561 ORTHO05D004351 4.2e-54 214.9 151 71.5
Atru.chr5.2428 Acer truncatum HOM05D003561 ORTHO05D004351 5.5e-54 214.5 149 71.8
Gohir.A03G184800 Gossypium hirsutum HOM05D003561 ORTHO05D004351 7.2e-54 214.2 149 69.8
Gorai.005G233700 Gossypium raimondii HOM05D003561 ORTHO05D004351 7.2e-54 214.2 149 69.8
Thecc.02G112400 Theobroma cacao HOM05D003561 ORTHO05D004351 1.6e-53 213.0 149 70.5
VMungo0720G2973 Vigna mungo HOM05D003561 ORTHO05D004351 3.6e-53 211.8 149 71.8
Gohir.D02G206300 Gossypium hirsutum HOM05D003561 ORTHO05D004351 6.1e-53 211.1 149 69.1
Psat6g216560 Pisum sativum HOM05D003561 ORTHO05D004351 6.1e-53 211.1 149 69.1
Actinidia27978 Actinidia chinensis HOM05D003561 ORTHO05D004351 1.0e-52 210.3 148 70.3
Eucgr.G01293 Eucalyptus grandis HOM05D003561 ORTHO05D004351 1.0e-52 210.3 149 68.5
Ciclev10027851m.g Citrus clementina HOM05D003561 ORTHO05D004351 5.1e-52 208.0 149 67.1
Glyma.20G131200 Glycine max HOM05D003561 ORTHO05D004351 8.8e-52 207.2 137 75.2
vmacro19460 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 3.3e-51 205.3 149 67.8
Rhsim05G0089400 Rhododendron simsii HOM05D003561 ORTHO05D004351 4.4e-51 204.9 151 66.9
Rhsim10G0161700 Rhododendron simsii HOM05D003561 ORTHO05D004351 4.4e-51 204.9 149 68.5
TWI75G1561 Tripterygium wilfordii HOM05D003561 ORTHO05D004351 2.2e-50 202.6 148 70.9
Nn5g30480 Nelumbo nucifera HOM05D003561 ORTHO05D004351 4.1e-49 198.4 149 66.4
Rhsim10G0161500 Rhododendron simsii HOM05D003561 ORTHO05D004351 4.1e-49 198.4 149 66.4
Medtr1g106905 Medicago truncatula HOM05D003561 ORTHO05D004351 5.3e-49 198.0 149 64.4
TPR.G27110 Trifolium pratense HOM05D003561 ORTHO05D004351 1.2e-48 196.8 149 67.1
COL.COLO4_32560 Corchorus olitorius HOM05D003561 ORTHO05D004351 2.0e-48 196.1 149 65.1
Peaxi162Scf00016g02531 Petunia axillaris HOM05D003561 ORTHO05D004351 4.5e-48 194.9 149 65.8
Sopen01g049600 Solanum pennellii HOM05D003561 ORTHO05D004351 2.2e-47 192.6 149 64.4
Solyc01g107360.4 Solanum lycopersicum HOM05D003561 ORTHO05D004351 3.8e-47 191.8 149 64.4
PGSC0003DMG400025758 Solanum tuberosum HOM05D003561 ORTHO05D004351 6.5e-47 191.0 149 63.8
Nitab4.5_0001480g0050 Nicotiana tabacum HOM05D003561 ORTHO05D004351 8.5e-47 190.7 149 65.1
PGR042G0884 Punica granatum HOM05D003561 ORTHO05D004351 8.5e-47 190.7 149 63.8
Migut.B00411 Erythranthe guttata HOM05D003561 ORTHO05D004351 1.1e-46 190.3 149 63.1
DCAR_001664 Daucus carota HOM05D003561 ORTHO05D004351 5.5e-46 188.0 150 62.0
Nitab4.5_0010275g0030 Nicotiana tabacum HOM05D003561 ORTHO05D004351 5.5e-46 188.0 149 63.8
MSTRG.16699 Avicennia marina HOM05D003561 ORTHO05D004351 3.6e-45 185.3 149 61.7
CiPaw.05G014100 Carya illinoinensis HOM05D003561 ORTHO05D004351 4.7e-45 184.9 117 76.9
Oeu011151.1 Olea europaea HOM05D003561 ORTHO05D004351 4.7e-45 184.9 149 60.4
Aqoxy6G02799 Aquilegia oxysepala HOM05D003561 ORTHO05D004351 7.9e-45 184.1 149 63.1
Cc02_g19520 Coffea canephora HOM05D003561 ORTHO05D004351 7.9e-45 184.1 149 65.1
GSVIVG01000167001 Vitis vinifera HOM05D003561 ORTHO05D004351 1.8e-44 183.0 149 57.7
PSO675G3219 Papaver somniferum HOM05D003561 ORTHO05D004351 8.8e-44 180.6 149 61.1
FAN20G0240 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.7e-42 175.3 158 63.9
PSO541G3211 Papaver somniferum HOM05D003561 ORTHO05D004351 1.1e-41 173.7 149 59.1
HanXRQChr04g0128551 Helianthus annuus HOM05D003561 ORTHO05D004351 5.3e-41 171.4 149 57.7
Duzib147G0573 Durio zibethinus HOM05D003561 ORTHO05D004351 9.1e-41 170.6 149 56.4
Dinv30056 Davidia involucrata HOM05D003561 ORTHO05D004351 1.2e-40 170.2 149 55.7
AUR62027366 Chenopodium quinoa HOM05D003561 ORTHO05D004351 2.0e-40 169.5 150 57.3
Manes.13G115200 Manihot esculenta HOM05D003561 ORTHO05D004351 2.0e-40 169.5 149 53.7
Hund06710 Selenicereus undatus HOM05D003561 ORTHO05D004351 2.0e-40 169.5 150 58.0
Lsat_1_v5_gn_7_85901 Lactuca sativa HOM05D003561 ORTHO05D004351 3.5e-40 168.7 149 57.7
COL.COLO4_11519 Corchorus olitorius HOM05D003561 ORTHO05D004351 4.5e-40 168.3 150 55.3
Gorai.003G028400 Gossypium raimondii HOM05D003561 ORTHO05D004351 5.9e-40 167.9 150 54.7
Thecc.01G067200 Theobroma cacao HOM05D003561 ORTHO05D004351 5.9e-40 167.9 150 57.3
Atru.chr3.214 Acer truncatum HOM05D003561 ORTHO05D004351 7.7e-40 167.5 151 56.3
Atru.chr3.226 Acer truncatum HOM05D003561 ORTHO05D004351 7.7e-40 167.5 151 56.3
Cfa004087 Carpinus fangiana HOM05D003561 ORTHO05D004351 7.7e-40 167.5 147 57.1
Ah.09g232050 Amaranthus hybridus HOM05D003561 ORTHO05D004351 1.3e-39 166.8 151 57.0
Gohir.D03G026700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 1.7e-39 166.4 150 54.7
SGA_v2.0_scaffold225G43001 Striga asiatica HOM05D003561 ORTHO05D004351 1.7e-39 166.4 174 50.0
Haze_15327 Corylus avellana HOM05D003561 ORTHO05D004351 2.9e-39 165.6 147 56.5
Actinidia12002 Actinidia chinensis HOM05D003561 ORTHO05D004351 5.0e-39 164.9 149 55.0
CiPaw.01G008500 Carya illinoinensis HOM05D003561 ORTHO05D004351 5.0e-39 164.9 149 55.7
ECA236G4994 Erigeron canadensis HOM05D003561 ORTHO05D004351 6.5e-39 164.5 149 60.4
Gohir.A02G153700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 6.5e-39 164.5 150 55.3
Hma1.2p1_0239F.1_g099850 Hydrangea macrophylla HOM05D003561 ORTHO05D004351 6.5e-39 164.5 149 55.7
RcHm_v2.0_Chr2g0107231 Rosa chinensis HOM05D003561 ORTHO05D004351 6.5e-39 164.5 149 58.4
FAN28G0575 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.5e-38 162.5 149 57.0
Prupe.8G138700 Prunus persica HOM05D003561 ORTHO05D004351 3.2e-38 162.2 88 89.8
FvH4_1g17060 Fragaria vesca HOM05D003561 ORTHO05D004351 7.2e-38 161.0 149 56.4
Lj7C86G5 Lonicera japonica HOM05D003561 ORTHO05D004351 9.4e-38 160.6 149 57.0
FAN19G0232 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.1e-37 159.5 149 55.7
FAN26G2049 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.1e-37 159.5 149 55.7
Prupe.6G225400 Prunus persica HOM05D003561 ORTHO05D004351 2.1e-37 159.5 149 54.4
MD02G1180800 Malus domestica HOM05D003561 ORTHO05D004351 3.6e-37 158.7 149 56.4
CSS0044154 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 6.1e-37 157.9 151 53.6
CANSAT01G2799 Cannabis sativa HOM05D003561 ORTHO05D004351 2.3e-36 156.0 147 51.7
SalBow6G5634 Salvia bowleyana HOM05D003561 ORTHO05D004351 3.0e-36 155.6 201 43.3
Ciclev10024935m.g Citrus clementina HOM05D003561 ORTHO05D004351 5.2e-36 154.8 149 52.3
AUR62003959 Chenopodium quinoa HOM05D003561 ORTHO05D004351 4.4e-35 151.8 148 56.1
Cpa.g.sc6.61 Carica papaya HOM05D003561 ORTHO05D004351 5.7e-35 151.4 134 57.5
AUR62038271 Chenopodium quinoa HOM05D003561 ORTHO05D004351 7.5e-35 151.0 151 55.0
Potri.007G051500 Populus trichocarpa HOM05D003561 ORTHO05D004351 1.7e-34 149.8 149 50.3
Rhsim10G0104800 Rhododendron simsii HOM05D003561 ORTHO05D004351 2.2e-34 149.4 149 51.7
BcaNung04160 Brassica carinata HOM05D003561 ORTHO05D004351 8.2e-34 147.5 149 52.3
PGR102G2010 Punica granatum HOM05D003561 ORTHO05D004351 1.4e-33 146.7 149 51.7
Sp7g32080 Schrenkiella parvula HOM05D003561 ORTHO05D004351 5.3e-33 144.8 149 52.3
EL10Ac6g15669 Beta vulgaris HOM05D003561 ORTHO05D004351 7.0e-33 144.4 149 53.0
Sopen02g014910 Solanum pennellii HOM05D003561 ORTHO05D004351 7.0e-33 144.4 149 49.7
Aa31sc72G40 Aethionema arabicum HOM05D003561 ORTHO05D004351 1.6e-32 143.3 149 51.7
C09p44740 Brassica napus HOM05D003561 ORTHO05D004351 1.6e-32 143.3 149 49.7
Hund29372 Selenicereus undatus HOM05D003561 ORTHO05D004351 1.6e-32 143.3 146 52.7
CAN.G1482.2 Capsicum annuum HOM05D003561 ORTHO05D004351 2.7e-32 142.5 149 48.3
BcaNung04991 Brassica carinata HOM05D003561 ORTHO05D004351 4.5e-32 141.7 149 50.3
C01p04490 Brassica napus HOM05D003561 ORTHO05D004351 5.9e-32 141.4 149 50.3
BolC1t00435H Brassica oleracea HOM05D003561 ORTHO05D004351 5.9e-32 141.4 149 50.3
AL7G16990 Arabidopsis lyrata HOM05D003561 ORTHO05D004351 7.7e-32 141.0 149 49.7
Ah.03g146260 Amaranthus hybridus HOM05D003561 ORTHO05D004351 2.9e-31 139.0 146 52.1
Hund29375 Selenicereus undatus HOM05D003561 ORTHO05D004351 2.9e-31 139.0 146 51.4
THA.LOC104819541 Tarenaya hassleriana HOM05D003561 ORTHO05D004351 2.9e-31 139.0 149 50.3
Solyc02g064800.3 Solanum lycopersicum HOM05D003561 ORTHO05D004351 3.8e-31 138.7 149 48.3
AT4G34280 Arabidopsis thaliana HOM05D003561 ORTHO05D004351 5.0e-31 138.3 149 49.0
Eucgr.H02268 Eucalyptus grandis HOM05D003561 ORTHO05D004351 5.0e-31 138.3 139 48.9
BraA01t00401Z Brassica rapa HOM05D003561 ORTHO05D004351 6.5e-31 137.9 149 49.7
PGSC0003DMG400013016 Solanum tuberosum HOM05D003561 ORTHO05D004351 1.1e-30 137.1 149 47.7
Glyma.10G259600 Glycine max HOM05D003561 ORTHO05D004351 1.5e-30 136.7 149 53.0
A01p04120 Brassica napus HOM05D003561 ORTHO05D004351 3.2e-30 135.6 149 49.0
ECA238G3157 Erigeron canadensis HOM05D003561 ORTHO05D004351 3.2e-30 135.6 149 50.3
Carub.0007s0608 Capsella rubella HOM05D003561 ORTHO05D004351 4.2e-30 135.2 149 48.3
SEGI_28319 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 1.2e-29 133.7 150 50.7
SEGI_36307 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 1.2e-29 133.7 150 50.7
Nitab4.5_0000284g0010 Nicotiana tabacum HOM05D003561 ORTHO05D004351 3.6e-29 132.1 149 45.6
HanXRQChr14g0449611 Helianthus annuus HOM05D003561 ORTHO05D004351 4.7e-29 131.7 149 48.3
BolC2t11906H Brassica oleracea HOM05D003561 ORTHO05D004351 1.0e-28 130.6 126 52.4
Nitab4.5_0000604g0020 Nicotiana tabacum HOM05D003561 ORTHO05D004351 2.3e-28 129.4 149 45.0
BolC9t55360H Brassica oleracea HOM05D003561 ORTHO05D004351 4.0e-28 128.6 126 52.4
BolC3t20255H Brassica oleracea HOM05D003561 ORTHO05D004351 8.8e-28 127.5 126 51.6
Thhalv10024491m.g Eutrema salsugineum HOM05D003561 ORTHO05D004351 5.7e-27 124.8 150 46.0
Lsat_1_v5_gn_2_83541 Lactuca sativa HOM05D003561 ORTHO05D004351 9.8e-27 124.0 149 43.6
DCAR_010841 Daucus carota HOM05D003561 ORTHO05D004351 1.7e-26 123.2 149 43.6
C02p15790 Brassica napus HOM05D003561 ORTHO05D004351 2.2e-26 122.9 126 51.6
Hund13924 Selenicereus undatus HOM05D003561 ORTHO05D004351 6.3e-26 121.3 145 46.9
CARHR242490 Cardamine hirsuta HOM05D003561 ORTHO05D004351 2.4e-25 119.4 148 47.3
Cc07_g06660 Coffea canephora HOM05D003561 ORTHO05D004351 1.6e-24 116.7 149 41.6
Pp3c18_4410 Physcomitrium patens HOM05D003561 ORTHO05D004351 8.3e-18 94.4 139 36.0
Pp3c22_17660 Physcomitrium patens HOM05D003561 ORTHO05D004351 8.3e-18 94.4 140 37.9
Oeu003572.1 Olea europaea HOM05D003561 ORTHO05D004351 7.0e-17 91.3 147 37.4
vmacro05379 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 3.5e-16 89.0 79 58.2
Peaxi162Scf00449g00016 Petunia axillaris HOM05D003561 ORTHO05D004351 1.7e-15 86.7 71 59.2
C09p50480 Brassica napus HOM05D003561 ORTHO05D004351 3.3e-14 82.4 65 58.5
AagrBONN_evm.TU.Sc2ySwM_340.381 Anthoceros agrestis HOM05D003561 ORTHO05D004351 7.3e-14 81.3 139 36.7
Cpa.g.sc292.9 Carica papaya HOM05D003561 ORTHO05D004351 1.2e-11 73.9 49 71.4
BcaC03g17819 Brassica carinata HOM05D003561 ORTHO05D004351 6.4e-10 68.2 85 43.5
C02p58430 Brassica napus HOM05D003561 ORTHO05D004351 6.4e-10 68.2 85 43.5
Sabra07G0045400 Salix brachista HOM05D003561 ORTHO05D004351 1.2e-08 63.9 85 40.0
Peaxi162Scf00449g00015 Petunia axillaris HOM05D003561 ORTHO05D306215 5.0e-07 58.5 86 36.0
C09p24450 Brassica napus HOM05D003561 ORTHO05D004351 3.3e-06 55.8 69 43.5
AUR62031283 Chenopodium quinoa HOM05D003561 ORTHO05D004351 3.3e-06 55.8 37 67.6


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