Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0253701 Rosa chinensis HOM05D008702 ORTHO05D003639 4.7e-297 1023.8 545 100.0
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 4.2e-282 974.2 545 95.4
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 1.1e-277 959.5 544 94.1
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 4.9e-270 934.1 544 91.7
RcHm_v2.0_Chr6g0263181 Rosa chinensis HOM05D008702 ORTHO05D003639 1.0e-251 873.2 481 96.7
RcHm_v2.0_Chr5g0074641 Rosa chinensis HOM05D008702 ORTHO05D347722 1.5e-154 550.4 308 97.1
RcHm_v2.0_Chr7g0219701 Rosa chinensis HOM05D008702 ORTHO05D344573 1.5e-149 533.9 308 93.5
RcHm_v2.0_Chr5g0004311 Rosa chinensis HOM05D008702 ORTHO05D347493 4.0e-147 525.8 348 84.8
RcHm_v2.0_Chr5g0076661 Rosa chinensis HOM05D008702 ORTHO05D340587 1.8e-131 473.8 267 95.9
RcHm_v2.0_Chr2g0142711 Rosa chinensis HOM05D008702 ORTHO05D344452 6.8e-131 471.9 259 98.1
RcHm_v2.0_Chr2g0138181 Rosa chinensis HOM05D008702 ORTHO05D342737 6.6e-126 455.3 266 92.9
RcHm_v2.0_Chr1g0320721 Rosa chinensis HOM05D008702 ORTHO05D345815 1.7e-121 440.7 267 91.0
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 8.7e-118 428.3 234 94.9
RcHm_v2.0_Chr1g0321611 Rosa chinensis HOM05D008702 ORTHO05D340610 1.1e-99 368.2 212 93.9
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 7.1e-96 355.5 183 96.7
RcHm_v2.0_Chr1g0323651 Rosa chinensis HOM05D008702 ORTHO05D003639 7.7e-90 335.5 187 92.5
RcHm_v2.0_Chr4g0419231 Rosa chinensis HOM05D008702 ORTHO05D003639 5.5e-88 329.3 174 94.3
RcHm_v2.0_Chr6g0263231 Rosa chinensis HOM05D008702 ORTHO05D341298 9.4e-72 275.4 150 97.3
RcHm_v2.0_Chr6g0263241 Rosa chinensis HOM05D008702 ORTHO05D003639 9.1e-67 258.8 142 97.2
RcHm_v2.0_Chr7g0238721 Rosa chinensis HOM05D008702 ORTHO05D003639 7.2e-64 249.2 133 100.0
RcHm_v2.0_Chr6g0249171 Rosa chinensis HOM05D008702 ORTHO05D003639 5.2e-62 243.0 142 91.5
RcHm_v2.0_Chr1g0321631 Rosa chinensis HOM05D008702 ORTHO05D003639 2.8e-60 237.3 120 95.0
RcHm_v2.0_Chr1g0320431 Rosa chinensis HOM05D008702 ORTHO05D003639 8.8e-54 215.7 112 94.6
RcHm_v2.0_Chr7g0238711 Rosa chinensis HOM05D008702 ORTHO05D345584 1.1e-43 182.2 99 96.0
RcHm_v2.0_Chr7g0234221 Rosa chinensis HOM05D008702 ORTHO05D341004 7.0e-43 179.5 98 95.9
RcHm_v2.0_Chr7g0234211 Rosa chinensis HOM05D008702 ORTHO05D347872 1.2e-29 135.6 74 98.6
RcHm_v2.0_Chr5g0038261 Rosa chinensis HOM05D008702 ORTHO05D003639 6.0e-26 123.2 95 71.6
RcHm_v2.0_Chr4g0401541 Rosa chinensis HOM05D008702 ORTHO05D003639 6.2e-23 113.2 72 86.1
RcHm_v2.0_Chr1g0321621 Rosa chinensis HOM05D008702 ORTHO05D003639 6.6e-09 66.6 31 96.8
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.3e-08 64.3 106 35.8
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 5.6e-08 63.5 106 35.8
FvH4_5g16044 Fragaria vesca HOM05D060084 ORTHO05D046536 2.1e-07 61.6 108 32.4
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 4.0e-06 57.4 126 30.2
FAN18G2128 Fragaria x ananassa HOM05D060084 ORTHO05D046536 5.3e-06 57.0 88 34.1


User provided reference genes

Program Settings