Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0253301 Rosa chinensis HOM05D066344 ORTHO05D050710 6.2e-52 207.2 108 100.0
RcHm_v2.0_Chr7g0229551 Rosa chinensis HOM05D066344 ORTHO05D050710 8.7e-46 186.8 108 90.7
RcHm_v2.0_Chr5g0022091 Rosa chinensis HOM05D000336 ORTHO05D002705 2.8e-20 102.1 58 89.7
FAN25G0380 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.9e-16 89.4 62 77.4
FAN11G2885 Fragaria x ananassa HOM05D000336 ORTHO05D002705 2.5e-16 89.0 58 84.5
CiPaw.02G175600 Carya illinoinensis HOM05D000336 ORTHO05D002705 6.3e-12 74.3 66 59.1
FAN21G2099 Fragaria x ananassa HOM05D000336 ORTHO05D002705 1.1e-11 73.6 58 70.7
FvH4_3g13380 Fragaria vesca HOM05D000336 ORTHO05D002705 5.3e-11 71.2 58 69.0
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 1.0e-09 67.0 89 46.1
MD01G1111300 Malus domestica HOM05D000336 ORTHO05D002705 1.3e-09 66.6 66 51.5
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.7e-09 66.2 66 54.5
Haze_16925 Corylus avellana HOM05D000336 ORTHO05D002705 2.2e-09 65.9 66 54.5
TWI60G1326 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 2.2e-09 65.9 73 52.1
Lj1A919T51 Lonicera japonica HOM05D000336 ORTHO05D002705 6.5e-09 64.3 66 54.5
Prupe.2G216800 Prunus persica HOM05D000336 ORTHO05D002705 1.9e-08 62.8 60 51.7
Sabra10G0169200 Salix brachista HOM05D000336 ORTHO05D002705 1.9e-08 62.8 71 50.7
Solyc09g015660.4 Solanum lycopersicum HOM05D000336 ORTHO05D002705 2.5e-08 62.4 66 54.5
Sopen09g009860 Solanum pennellii HOM05D000336 ORTHO05D002705 2.5e-08 62.4 66 54.5
FAN16G1640 Fragaria x ananassa HOM05D000336 ORTHO05D002705 3.2e-08 62.0 57 61.4
Potri.008G043000 Populus trichocarpa HOM05D000336 ORTHO05D002705 3.2e-08 62.0 71 49.3
CSS0016673 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 4.2e-08 61.6 66 53.0
Gohir.D10G215500 Gossypium hirsutum HOM05D000336 ORTHO05D002705 4.2e-08 61.6 68 50.0
Gorai.011G241100 Gossypium raimondii HOM05D000336 ORTHO05D002705 4.2e-08 61.6 68 50.0
SalBow3G0905 Salvia bowleyana HOM05D000336 ORTHO05D002705 4.2e-08 61.6 62 56.5
TWI34G1554 Tripterygium wilfordii HOM05D000336 ORTHO05D002705 7.2e-08 60.8 68 51.5
Haze_05184 Corylus avellana HOM05D000336 ORTHO05D002705 1.2e-07 60.1 58 55.2
DCAR_015307 Daucus carota HOM05D000336 ORTHO05D002705 1.2e-07 60.1 66 51.5
Lsat_1_v5_gn_1_75080 Lactuca sativa HOM05D000336 ORTHO05D002705 1.6e-07 59.7 66 50.0
Sabra08G0029600 Salix brachista HOM05D000336 ORTHO05D002705 1.6e-07 59.7 69 49.3
FvH4_7g19980 Fragaria vesca HOM05D000336 ORTHO05D002705 2.1e-07 59.3 64 50.0
FAN03G1721 Fragaria x ananassa HOM05D000336 ORTHO05D002705 2.1e-07 59.3 64 50.0
FAN06G4785 Fragaria x ananassa HOM05D000336 ORTHO05D002705 2.1e-07 59.3 64 50.0
Prupe.4G121200 Prunus persica HOM05D000336 ORTHO05D002705 2.1e-07 59.3 62 54.8
Actinidia35803 Actinidia chinensis HOM05D000336 ORTHO05D002705 2.7e-07 58.9 66 50.0
Cpa.g.sc53.42 Carica papaya HOM05D000336 ORTHO05D002705 2.7e-07 58.9 68 50.0
Cfa001168 Carpinus fangiana HOM05D000336 ORTHO05D002705 2.7e-07 58.9 58 53.4
Rhsim04G0175400 Rhododendron simsii HOM05D000336 ORTHO05D002705 2.7e-07 58.9 69 47.8
QL11p010714 Quercus lobata HOM05D000336 ORTHO05D002705 3.6e-07 58.5 60 51.7
Lalb_Chr19g0129591 Lupinus albus HOM05D000336 ORTHO05D002705 4.7e-07 58.2 66 42.4
TAR633G1495 Trochodendron aralioides HOM05D000336 ORTHO05D002705 4.7e-07 58.2 86 43.0
Glyma.17G182700 Glycine max HOM05D000336 ORTHO05D002705 6.1e-07 57.8 66 47.0
vmacro00765 Vaccinium macrocarpon HOM05D000336 ORTHO05D002705 6.1e-07 57.8 79 46.8
Actinidia35805 Actinidia chinensis HOM05D000336 ORTHO05D002705 8.0e-07 57.4 66 48.5
CSS0015604 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D002705 8.0e-07 57.4 73 49.3
Ciclev10031383m.g Citrus clementina HOM05D000336 ORTHO05D002705 1.0e-06 57.0 68 45.6
HanXRQChr15g0496731 Helianthus annuus HOM05D000336 ORTHO05D002705 1.0e-06 57.0 66 48.5
Nitab4.5_0005460g0050 Nicotiana tabacum HOM05D000336 ORTHO05D002705 1.0e-06 57.0 69 49.3
RcHm_v2.0_Chr1g0363941 Rosa chinensis HOM05D000336 ORTHO05D002705 1.0e-06 57.0 61 50.8
Nn2g13023 Nelumbo nucifera HOM05D000336 ORTHO05D002705 1.4e-06 56.6 65 52.3
Sed0006647 Sechium edule HOM05D000336 ORTHO05D002705 1.4e-06 56.6 66 47.0
Duzib248G0328 Durio zibethinus HOM05D000336 ORTHO05D002705 1.8e-06 56.2 65 47.7
Actinidia03034 Actinidia chinensis HOM05D000336 ORTHO05D002705 2.3e-06 55.8 66 48.5
Lalb_Chr03g0036001 Lupinus albus HOM05D000336 ORTHO05D002705 3.0e-06 55.5 69 46.4
Peaxi162Scf00108g00148 Petunia axillaris HOM05D000336 ORTHO05D002705 3.0e-06 55.5 71 49.3
CANSAT54G2317 Cannabis sativa HOM05D000336 ORTHO05D002705 5.2e-06 54.7 66 48.5
Cpa.g.sc30.64 Carica papaya HOM05D000336 ORTHO05D002705 5.2e-06 54.7 81 43.2
Sed0009569 Sechium edule HOM05D000336 ORTHO05D002705 5.2e-06 54.7 64 51.6
CsaV3_5G025830 Cucumis sativus L. HOM05D000336 ORTHO05D002705 6.7e-06 54.3 66 43.9
Eucgr.J01109 Eucalyptus grandis HOM05D000336 ORTHO05D002705 8.8e-06 53.9 75 44.0
MD10G1224000 Malus domestica HOM05D000336 ORTHO05D002705 8.8e-06 53.9 62 53.2
Phvul.004G074600 Phaseolus vulgaris HOM05D000336 ORTHO05D002705 8.8e-06 53.9 66 43.9
GSVIVG01034328001 Vitis vinifera HOM05D000336 ORTHO05D002705 8.8e-06 53.9 64 50.0


User provided reference genes

Program Settings