Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0252671 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-26 121.3 59 100.0
RcHm_v2.0_Chr5g0072071 Rosa chinensis HOM05D000539 ORTHO05D000592 2.8e-22 107.8 53 96.2
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-18 94.0 51 86.3
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 9.4e-18 92.8 51 84.3
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-15 85.9 51 80.4
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 2.6e-12 74.7 51 72.5
RcHm_v2.0_Chr1g0328151 Rosa chinensis HOM05D000539 ORTHO05D000233 4.5e-12 73.9 37 91.9
RcHm_v2.0_Chr1g0329531 Rosa chinensis HOM05D000539 ORTHO05D000233 5.9e-12 73.6 51 72.5
RcHm_v2.0_Chr2g0108861 Rosa chinensis HOM05D000539 ORTHO05D000233 7.7e-12 73.2 51 70.6
RcHm_v2.0_Chr5g0079551 Rosa chinensis HOM05D000539 ORTHO05D000233 1.3e-11 72.4 51 72.5
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 3.8e-11 70.9 51 68.6
RcHm_v2.0_Chr4g0395771 Rosa chinensis HOM05D000539 ORTHO05D000592 3.8e-11 70.9 53 64.2
RcHm_v2.0_Chr1g0340611 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-11 70.5 51 68.6
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 5.0e-11 70.5 51 62.7
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 6.5e-11 70.1 51 64.7
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 8.5e-11 69.7 51 64.7
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 1.4e-10 68.9 51 64.7
RcHm_v2.0_Chr2g0090831 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-10 67.4 52 63.5
RcHm_v2.0_Chr4g0391901 Rosa chinensis HOM05D000539 ORTHO05D000233 4.2e-10 67.4 52 63.5
Prupe.3G107500 Prunus persica HOM05D000539 ORTHO05D000233 5.5e-10 67.0 51 60.8
RcHm_v2.0_Chr2g0132431 Rosa chinensis HOM05D000539 ORTHO05D000233 5.5e-10 67.0 51 64.7
RcHm_v2.0_Chr5g0072981 Rosa chinensis HOM05D000539 ORTHO05D000233 5.5e-10 67.0 51 60.8
FAN02G4277 Fragaria x ananassa HOM05D000539 ORTHO05D000233 1.2e-09 65.9 51 62.7
RcHm_v2.0_Chr1g0342101 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-09 65.5 51 62.7
RcHm_v2.0_Chr7g0228371 Rosa chinensis HOM05D000539 ORTHO05D000233 1.6e-09 65.5 51 62.7
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 4.7e-09 63.9 51 60.8
FAN19G0390 Fragaria x ananassa HOM05D000539 ORTHO05D000233 4.7e-09 63.9 51 60.8
RcHm_v2.0_Chr5g0066151 Rosa chinensis HOM05D000539 ORTHO05D000233 4.7e-09 63.9 51 54.9
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-07 58.9 56 50.0
Prupe.4G254700 Prunus persica HOM05D000539 ORTHO05D000233 2.0e-07 58.5 53 52.8
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 4.4e-07 57.4 53 50.9
FvH4_2g07751 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-07 56.6 56 50.0
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 6.3e-06 53.5 56 48.2
FAN19G1975 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.3e-06 53.5 56 46.4
FAN09G2875 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.2e-06 53.1 51 49.0
FAN26G0195 Fragaria x ananassa HOM05D000539 ORTHO05D000233 8.2e-06 53.1 52 48.1


User provided reference genes

Program Settings