Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0250721 Rosa chinensis HOM05D036034 ORTHO05D000002 1.6e-140 502.7 242 100.0
RcHm_v2.0_Chr1g0321881 Rosa chinensis HOM05D036034 ORTHO05D341327 6.3e-28 128.6 70 88.6
RcHm_v2.0_Chr6g0273001 Rosa chinensis HOM05D036034 ORTHO05D341807 6.3e-28 128.6 70 88.6
RcHm_v2.0_Chr5g0021481 Rosa chinensis HOM05D000004 ORTHO05D000002 2.3e-22 110.2 188 37.2
FvH4_2g19792 Fragaria vesca HOM05D000004 ORTHO05D000002 1.6e-10 70.9 166 29.5
FvH4_3g30933 Fragaria vesca HOM05D000004 ORTHO05D000002 2.9e-09 66.6 157 32.5
RcHm_v2.0_Chr4g0397431 Rosa chinensis HOM05D000004 ORTHO05D000002 1.9e-08 63.9 187 28.9
FvH4_6g20641 Fragaria vesca HOM05D000004 ORTHO05D000002 5.6e-08 62.4 183 27.9
FvH4_4g06573 Fragaria vesca HOM05D000004 ORTHO05D000002 4.7e-07 59.3 165 29.7
RcHm_v2.0_Chr6g0286171 Rosa chinensis HOM05D000004 ORTHO05D000002 5.2e-06 55.8 159 27.7
ECA240G0488 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.8e-06 55.5 168 28.6
RcHm_v2.0_Chr2g0174581 Rosa chinensis HOM05D000004 ORTHO05D000002 8.9e-06 55.1 117 33.3
RcHm_v2.0_Chr5g0078031 Rosa chinensis HOM05D000004 ORTHO05D000002 8.9e-06 55.1 110 32.7
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 8.9e-06 55.1 169 24.3


User provided reference genes

Program Settings