Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0248531 Rosa chinensis HOM05D000031 ORTHO05D019088 2.5e-43 178.3 87 100.0
FAN15G1649 Fragaria x ananassa HOM05D000031 ORTHO05D001033 7.0e-30 133.7 86 81.4
FvH4_2g03431 Fragaria vesca HOM05D000106 ORTHO05D019088 1.7e-28 129.0 87 75.9
FvH4_2g09830 Fragaria vesca HOM05D000031 ORTHO05D001033 1.7e-20 102.4 80 60.0
FAN15G1957 Fragaria x ananassa HOM05D000031 ORTHO05D001033 1.7e-20 102.4 85 57.6
RcHm_v2.0_Chr6g0266181 Rosa chinensis HOM05D000031 ORTHO05D001033 2.3e-20 102.1 80 61.2
RcHm_v2.0_Chr6g0266231 Rosa chinensis HOM05D000031 ORTHO05D019088 9.5e-19 96.7 77 59.7
FAN15G3624 Fragaria x ananassa HOM05D000031 ORTHO05D001033 3.6e-18 94.7 78 62.8
RcHm_v2.0_Chr6g0248591 Rosa chinensis HOM05D000031 ORTHO05D001033 3.6e-18 94.7 81 61.7
Prupe.8G149400 Prunus persica HOM05D000031 ORTHO05D001033 2.4e-17 92.0 81 63.0
RcHm_v2.0_Chr7g0194481 Rosa chinensis HOM05D000031 ORTHO05D019088 3.1e-17 91.7 79 58.2
RcHm_v2.0_Chr6g0248561 Rosa chinensis HOM05D000031 ORTHO05D001033 6.8e-17 90.5 76 64.5
FAN15G0364 Fragaria x ananassa HOM05D000031 ORTHO05D001033 1.5e-16 89.4 83 61.4
RcHm_v2.0_Chr7g0194561 Rosa chinensis HOM05D000031 ORTHO05D019088 5.8e-16 87.4 77 58.4
MD10G1109800 Malus domestica HOM05D000031 ORTHO05D001033 1.3e-15 86.3 72 59.7
RcHm_v2.0_Chr6g0248551 Rosa chinensis HOM05D000031 ORTHO05D001033 1.7e-15 85.9 82 59.8
FvH4_2g03430 Fragaria vesca HOM05D000031 ORTHO05D001033 2.9e-15 85.1 83 59.0
FAN15G1926 Fragaria x ananassa HOM05D000031 ORTHO05D001033 6.4e-15 84.0 85 55.3
FAN24G2007 Fragaria x ananassa HOM05D000031 ORTHO05D001033 8.4e-15 83.6 85 57.6
Prupe.8G149600 Prunus persica HOM05D000031 ORTHO05D001033 3.2e-14 81.6 75 61.3
Prupe.8G149900 Prunus persica HOM05D000031 ORTHO05D001033 5.4e-14 80.9 73 61.6
Prupe.8G149300 Prunus persica HOM05D000031 ORTHO05D001033 7.1e-14 80.5 72 62.5
MD05G1105300 Malus domestica HOM05D000031 ORTHO05D001033 3.5e-13 78.2 71 54.9
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 1.1e-11 73.2 68 55.9
Haze_10306 Corylus avellana HOM05D000031 ORTHO05D001033 1.6e-10 69.3 72 51.4
MD10G1109500 Malus domestica HOM05D000031 ORTHO05D001033 1.6e-10 69.3 54 63.0
MD10G1109700 Malus domestica HOM05D000134 ORTHO05D019088 3.6e-10 68.2 60 61.7
Haze_10305 Corylus avellana HOM05D000031 ORTHO05D001033 8.1e-10 67.0 70 51.4
Peaxi162Scf00152g00648 Petunia axillaris HOM05D000031 ORTHO05D001033 8.1e-10 67.0 78 46.2
RcHm_v2.0_Chr6g0248521 Rosa chinensis HOM05D000031 ORTHO05D001033 8.1e-10 67.0 83 53.0
Dinv16054 Davidia involucrata HOM05D000031 ORTHO05D001033 1.4e-09 66.2 68 48.5
CSS0018357 Camellia sinensis var. sinensis HOM05D000031 ORTHO05D001033 1.8e-09 65.9 79 39.2
Dinv09509 Davidia involucrata HOM05D000031 ORTHO05D001033 3.1e-09 65.1 66 54.5
Dinv04072 Davidia involucrata HOM05D000031 ORTHO05D001033 5.3e-09 64.3 68 51.5
Dinv09512 Davidia involucrata HOM05D000031 ORTHO05D001033 5.3e-09 64.3 68 51.5
Oeu059872.1 Olea europaea HOM05D000031 ORTHO05D001033 6.9e-09 63.9 68 48.5
Dinv09508 Davidia involucrata HOM05D000031 ORTHO05D001033 2.0e-08 62.4 70 44.3
Dinv09511 Davidia involucrata HOM05D000031 ORTHO05D019088 2.0e-08 62.4 70 44.3
Haze_10307 Corylus avellana HOM05D000031 ORTHO05D001033 3.4e-08 61.6 65 58.5
Oeu059871.1 Olea europaea HOM05D000031 ORTHO05D001033 7.6e-08 60.5 69 44.9
QL05p025050 Quercus lobata HOM05D000031 ORTHO05D001033 7.6e-08 60.5 75 40.0
Cc10_g13850 Coffea canephora HOM05D000031 ORTHO05D001033 1.7e-07 59.3 84 39.3
QL08p004070 Quercus lobata HOM05D000031 ORTHO05D005756 1.7e-07 59.3 75 38.7
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 2.2e-07 58.9 75 38.7
QL08p004316 Quercus lobata HOM05D000031 ORTHO05D001033 2.2e-07 58.9 75 38.7
QL08p004500 Quercus lobata HOM05D000031 ORTHO05D001033 2.9e-07 58.5 71 43.7
QL08p004686 Quercus lobata HOM05D001458 ORTHO05D007170 2.9e-07 58.5 75 38.7
AT3G57720 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 4.9e-07 57.8 74 40.5
QL08p004652 Quercus lobata HOM05D000031 ORTHO05D001033 4.9e-07 57.8 72 38.9
Hma1.2p1_1208F.1_g267160 Hydrangea macrophylla HOM05D000031 ORTHO05D001033 8.4e-07 57.0 72 43.1
QL08p004363 Quercus lobata HOM05D000031 ORTHO05D001033 8.4e-07 57.0 78 38.5
QL11p054265 Quercus lobata HOM05D000031 ORTHO05D001033 8.4e-07 57.0 79 38.0
QL11p054297 Quercus lobata HOM05D000031 ORTHO05D001033 8.4e-07 57.0 78 38.5
Nitab4.5_0000088g0050 Nicotiana tabacum HOM05D000031 ORTHO05D001033 1.1e-06 56.6 71 40.8
QL08p058318 Quercus lobata HOM05D000031 ORTHO05D001033 1.1e-06 56.6 75 37.3
Peaxi162Scf01022g00031 Petunia axillaris HOM05D000031 ORTHO05D001033 1.9e-06 55.8 64 51.6
QL08p004271 Quercus lobata HOM05D000031 ORTHO05D001033 1.9e-06 55.8 75 37.3
Dinv04071 Davidia involucrata HOM05D000031 ORTHO05D001033 2.4e-06 55.5 64 53.1
MD05G1105100 Malus domestica HOM05D000031 ORTHO05D019088 2.4e-06 55.5 64 50.0
Hma1.2p1_0661F.1_g197870 Hydrangea macrophylla HOM05D000031 ORTHO05D001033 3.2e-06 55.1 59 47.5
CiPaw.07G003000 Carya illinoinensis HOM05D000031 ORTHO05D001033 4.2e-06 54.7 76 42.1
QL06p028372 Quercus lobata HOM05D000031 ORTHO05D001033 4.2e-06 54.7 69 40.6
QL08p004543 Quercus lobata HOM05D000031 ORTHO05D001033 4.2e-06 54.7 72 40.3
QL08p058262 Quercus lobata HOM05D000031 ORTHO05D001033 4.2e-06 54.7 71 38.0
Oeu014915.1 Olea europaea HOM05D000031 ORTHO05D001033 5.4e-06 54.3 63 47.6
Oeu024871.1 Olea europaea HOM05D000031 ORTHO05D001033 5.4e-06 54.3 82 40.2
QL11p054347 Quercus lobata HOM05D000031 ORTHO05D001033 5.4e-06 54.3 73 39.7
Potri.002G003300 Populus trichocarpa HOM05D000031 ORTHO05D001033 7.1e-06 53.9 74 41.9
TAR628G0601 Trochodendron aralioides HOM05D000031 ORTHO05D001033 7.1e-06 53.9 73 41.1
Dinv30778 Davidia involucrata HOM05D000031 ORTHO05D001033 9.3e-06 53.5 68 44.1
FAN27G3298 Fragaria x ananassa HOM05D000031 ORTHO05D001033 9.3e-06 53.5 56 57.1
QL08p058293 Quercus lobata HOM05D000031 ORTHO05D001033 9.3e-06 53.5 62 45.2


User provided reference genes

Program Settings