Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0248181 Rosa chinensis HOM05D016124 ORTHO05D020665 1.4e-50 202.6 101 100.0
FvH4_4g14350 Fragaria vesca HOM05D016124 ORTHO05D020665 1.2e-09 66.6 69 53.6
RcHm_v2.0_Chr1g0365191 Rosa chinensis HOM05D016124 ORTHO05D020665 1.2e-09 66.6 42 83.3
FvH4_2g13832 Fragaria vesca HOM05D016124 ORTHO05D020665 6.1e-09 64.3 99 43.4
FvH4_3g26701 Fragaria vesca HOM05D016124 ORTHO05D020665 8.0e-09 63.9 68 52.9
FvH4_6g31290 Fragaria vesca HOM05D000325 ORTHO05D002025 1.0e-08 63.5 41 75.6
FAN14G4325 Fragaria x ananassa HOM05D000325 ORTHO05D002025 1.0e-08 63.5 41 75.6
FAN05G3340 Fragaria x ananassa HOM05D006782 ORTHO05D200376 1.8e-08 62.8 43 69.8
FAN11G1851 Fragaria x ananassa HOM05D016124 ORTHO05D020665 3.0e-08 62.0 42 71.4
FAN09G2401 Fragaria x ananassa HOM05D000325 ORTHO05D002025 6.7e-08 60.8 41 70.7
RcHm_v2.0_Chr2g0138021 Rosa chinensis HOM05D000325 ORTHO05D002025 6.7e-08 60.8 43 67.4
Haze_16402 Corylus avellana HOM05D000325 ORTHO05D002025 1.1e-07 60.1 55 52.7
FAN24G3517 Fragaria x ananassa HOM05D016124 ORTHO05D020665 1.5e-07 59.7 41 70.7
FAN05G5121 Fragaria x ananassa HOM05D000325 ORTHO05D002025 4.4e-07 58.2 41 68.3
Gohir.A05G130500 Gossypium hirsutum HOM05D000325 ORTHO05D002025 5.7e-07 57.8 43 69.8
Gohir.D05G129900 Gossypium hirsutum HOM05D000325 ORTHO05D002025 5.7e-07 57.8 43 69.8
Gorai.009G133700 Gossypium raimondii HOM05D000325 ORTHO05D002025 5.7e-07 57.8 43 69.8
Cfa002076 Carpinus fangiana HOM05D000325 ORTHO05D002025 2.2e-06 55.8 43 62.8
Duzib192G0932 Durio zibethinus HOM05D000325 ORTHO05D002025 2.2e-06 55.8 43 65.1
CAN.G438.73 Capsicum annuum HOM05D000325 ORTHO05D002025 2.8e-06 55.5 43 55.8
Duzib235G0290 Durio zibethinus HOM05D000325 ORTHO05D002025 2.8e-06 55.5 37 70.3
MBI15_g08167_MAGBIO Magnolia biondii HOM05D000325 ORTHO05D002025 3.7e-06 55.1 55 50.9
Nitab4.5_0002308g0050 Nicotiana tabacum HOM05D000325 ORTHO05D002025 3.7e-06 55.1 37 62.2
Solyc03g120120.3 Solanum lycopersicum HOM05D000325 ORTHO05D002025 3.7e-06 55.1 37 62.2
Sopen03g038990 Solanum pennellii HOM05D000325 ORTHO05D002025 3.7e-06 55.1 37 62.2
COL.COLO4_30389 Corchorus olitorius HOM05D000325 ORTHO05D002025 4.8e-06 54.7 38 65.8
CANSAT56G0184 Cannabis sativa HOM05D000325 ORTHO05D002025 6.3e-06 54.3 38 65.8
Nn2g11758 Nelumbo nucifera HOM05D000325 ORTHO05D002025 6.3e-06 54.3 43 58.1
Nitab4.5_0000671g0130 Nicotiana tabacum HOM05D000325 ORTHO05D002025 8.2e-06 53.9 37 62.2


User provided reference genes

Program Settings