Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.1e-166 589.0 304 100.0
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.0e-149 530.4 300 92.7
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.1e-144 514.6 292 92.8
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.7e-142 509.6 300 90.3
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 3.5e-132 475.3 308 84.7
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 6.5e-123 444.5 310 78.4
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 1.0e-107 394.0 311 71.1
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 9.5e-106 387.5 309 68.9
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 6.8e-104 381.3 223 91.9
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 1.5e-103 380.2 310 66.8
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 2.2e-102 376.3 315 65.7
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 8.3e-102 374.4 304 65.8
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.1e-101 374.0 218 84.4
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 3.2e-101 372.5 255 74.9
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 3.5e-100 369.0 319 66.1
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 5.9e-100 368.2 308 66.2
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.9e-99 365.9 247 73.7
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 5.0e-99 365.2 209 85.6
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 6.6e-99 364.8 220 82.3
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.5e-98 362.8 256 72.7
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 5.6e-98 361.7 223 78.9
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 8.0e-97 357.8 244 73.4
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 3.1e-96 355.9 233 75.5
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 6.8e-96 354.8 295 65.8
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 6.8e-96 354.8 288 65.3
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 8.9e-96 354.4 227 77.1
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 8.9e-96 354.4 298 64.4
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.2e-95 354.0 232 78.0
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.2e-95 354.0 254 69.7
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.0e-95 353.2 252 70.2
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 4.4e-95 352.1 307 63.2
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 7.5e-95 351.3 297 63.3
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 1.7e-94 350.1 294 66.0
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.2e-94 349.7 202 84.2
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 4.9e-94 348.6 307 62.5
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.4e-93 347.1 287 66.2
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.4e-93 346.3 291 64.9
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 4.1e-93 345.5 293 64.2
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 7.0e-93 344.7 227 77.1
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 9.2e-93 344.4 288 64.6
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.6e-92 343.6 227 75.8
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.7e-92 342.8 310 64.5
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 6.0e-92 341.7 227 75.3
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 1.0e-91 340.9 227 75.3
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.7e-91 340.1 242 69.8
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 5.0e-91 338.6 238 73.9
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 6.6e-91 338.2 285 64.6
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.5e-90 337.0 315 62.5
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 2.5e-90 336.3 291 63.2
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 2.5e-90 336.3 212 76.4
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 7.3e-90 334.7 233 73.0
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.6e-89 333.6 312 59.0
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.6e-89 333.6 280 65.0
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.6e-89 332.4 220 73.6
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 8.0e-89 331.3 280 64.6
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.1e-88 330.9 232 72.8
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 3.1e-88 329.3 277 65.3
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 6.8e-88 328.2 282 65.6
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.5e-87 327.0 304 59.9
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 4.4e-87 325.5 311 59.2
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 4.4e-87 325.5 311 58.5
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 7.5e-87 324.7 310 59.4
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 7.5e-87 324.7 305 59.3
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 9.8e-87 324.3 289 60.6
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.7e-86 322.4 290 62.4
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 4.9e-86 322.0 305 59.7
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 8.3e-86 321.2 285 62.5
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 8.3e-86 321.2 279 63.1
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 8.3e-86 321.2 310 59.0
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 1.1e-85 320.9 305 59.3
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.1e-85 320.9 219 71.2
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 1.4e-85 320.5 283 62.2
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 4.1e-85 318.9 288 62.2
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 9.2e-85 317.8 285 62.5
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 9.2e-85 317.8 285 62.1
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 9.2e-85 317.8 305 58.7
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 9.2e-85 317.8 285 62.1
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 9.2e-85 317.8 285 62.1
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.5e-82 310.5 295 59.3
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.3e-82 308.9 234 70.9
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 3.6e-81 305.8 301 59.1
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 4.0e-80 302.4 291 59.1
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 6.4e-78 295.0 271 57.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 3.2e-77 292.7 210 66.2
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 9.2e-77 291.2 212 69.8
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 6.6e-75 285.0 206 69.9
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 6.6e-75 285.0 204 71.1
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.5e-74 283.9 212 65.1
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 4.7e-73 278.9 278 56.8
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.7e-73 278.9 209 67.9
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 1.8e-72 276.9 198 71.7
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 6.8e-72 275.0 180 77.8
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 4.4e-71 272.3 266 59.8
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.9e-70 269.6 185 69.2
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.3e-67 260.8 173 72.3
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 4.3e-66 255.8 249 55.4
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.1e-57 226.9 242 56.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.1e-56 224.6 139 78.4
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 1.8e-51 207.2 195 54.4
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 3.8e-46 189.5 151 64.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 4.3e-42 176.0 105 77.1
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 3.1e-40 169.9 195 45.1
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 4.5e-39 166.0 174 56.9
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 1.2e-36 157.9 108 71.3
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 3.9e-35 152.9 197 41.1
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 6.3e-33 145.6 109 63.3
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 9.0e-32 141.7 82 80.5
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 4.5e-31 139.4 102 68.6
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 7.9e-28 128.6 107 59.8
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.0e-27 128.3 136 55.9
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 2.3e-27 127.1 202 35.6
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 4.8e-25 119.4 77 76.6
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 4.7e-20 102.8 70 75.7
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.4e-19 101.3 68 70.6
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 6.7e-19 99.0 58 79.3
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.5e-18 97.8 59 72.9
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.4e-16 91.3 55 80.0
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 3.5e-15 86.7 67 64.2
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.7e-09 66.6 57 57.9
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.8e-06 56.6 92 39.1


User provided reference genes

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