Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0083411 Rosa chinensis HOM05D025923 ORTHO05D030523 2.7e-169 598.6 307 100.0
RcHm_v2.0_Chr5g0083541 Rosa chinensis HOM05D025923 ORTHO05D030523 2.3e-168 595.5 307 99.7
RcHm_v2.0_Chr5g0083661 Rosa chinensis HOM05D001582 ORTHO05D001598 4.4e-135 485.0 293 86.7
FvH4_3g45511 Fragaria vesca HOM05D001582 ORTHO05D001598 2.9e-118 429.1 293 77.8
RcHm_v2.0_Chr5g0083621 Rosa chinensis HOM05D025923 ORTHO05D030523 3.6e-113 412.1 219 96.3
FAN25G1850 Fragaria x ananassa HOM05D001582 ORTHO05D001598 2.0e-79 300.1 210 75.2
FAN16G2382 Fragaria x ananassa HOM05D001582 ORTHO05D001598 2.5e-74 283.1 210 72.9
Prupe.2G124200 Prunus persica HOM05D001582 ORTHO05D001598 1.8e-72 276.9 303 55.4
FAN21G3272 Fragaria x ananassa HOM05D001582 ORTHO05D001598 1.1e-50 204.5 137 77.4
MD09G1283600 Malus domestica HOM05D001582 ORTHO05D001598 7.4e-50 201.8 298 45.0
Haze_02766 Corylus avellana HOM05D001582 ORTHO05D001598 4.3e-21 106.3 187 39.0
Cfa011101 Carpinus fangiana HOM05D001582 ORTHO05D001598 1.2e-20 104.8 187 38.5
QL10p050493 Quercus lobata HOM05D001582 ORTHO05D001598 5.2e-19 99.4 264 31.8
Dinv44080 Davidia involucrata HOM05D001582 ORTHO05D001598 7.5e-18 95.5 170 41.2
CANSAT11G1346 Cannabis sativa HOM05D001582 ORTHO05D001598 9.2e-16 88.6 152 37.5
CiPaw.13G028700 Carya illinoinensis HOM05D001582 ORTHO05D001598 6.6e-14 82.4 183 35.5
QL04p033416 Quercus lobata HOM05D025923 ORTHO05D030523 8.6e-14 82.0 102 45.1
TAR636G1043 Trochodendron aralioides HOM05D001582 ORTHO05D001598 1.2e-12 78.2 160 34.4
Ciclev10018658m.g Citrus clementina HOM05D001582 ORTHO05D001598 2.6e-10 70.5 202 30.7
Lj6g0002984 Lotus japonicus HOM05D001582 ORTHO05D001598 4.4e-10 69.7 91 45.1
Actinidia40395 Actinidia chinensis HOM05D001582 ORTHO05D001598 5.4e-08 62.8 269 26.8
GSVIVG01027211001 Vitis vinifera HOM05D001582 ORTHO05D001598 9.2e-08 62.0 148 35.1
TWI14G1174 Tripterygium wilfordii HOM05D001582 ORTHO05D001598 1.6e-07 61.2 149 30.2
TWI14G0381 Tripterygium wilfordii HOM05D001582 ORTHO05D001598 2.0e-07 60.8 149 30.2
CSS0040695 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 2.7e-07 60.5 307 25.7
ClCG09G006570 Citrullus lanatus HOM05D001582 ORTHO05D001598 2.7e-07 60.5 109 30.3
Thecc.01G389500 Theobroma cacao HOM05D001582 ORTHO05D001598 2.7e-07 60.5 179 30.7
Glyma.20G041100 Glycine max HOM05D001582 ORTHO05D001598 4.6e-07 59.7 142 32.4
MELO3C002810.2 Cucumis melo HOM05D001582 ORTHO05D001598 5.0e-06 56.2 109 29.4


User provided reference genes

Program Settings