Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0082141 Rosa chinensis HOM05D000687 ORTHO05D000515 1.7e-37 158.7 74 100.0
RcHm_v2.0_Chr5g0081761 Rosa chinensis HOM05D000687 ORTHO05D000515 2.6e-17 91.7 46 93.5
RcHm_v2.0_Chr5g0081931 Rosa chinensis HOM05D000687 ORTHO05D000515 2.6e-17 91.7 46 93.5
RcHm_v2.0_Chr5g0082231 Rosa chinensis HOM05D000687 ORTHO05D000515 2.6e-17 91.7 46 93.5
RcHm_v2.0_Chr5g0082501 Rosa chinensis HOM05D000687 ORTHO05D000515 2.6e-17 91.7 46 93.5
RcHm_v2.0_Chr5g0082171 Rosa chinensis HOM05D000687 ORTHO05D000515 3.4e-17 91.3 46 91.3
RcHm_v2.0_Chr5g0082391 Rosa chinensis HOM05D000687 ORTHO05D000515 7.6e-17 90.1 46 91.3
RcHm_v2.0_Chr5g0082751 Rosa chinensis HOM05D000687 ORTHO05D000515 7.6e-17 90.1 46 91.3
RcHm_v2.0_Chr5g0082781 Rosa chinensis HOM05D000687 ORTHO05D000515 1.7e-16 89.0 46 91.3
RcHm_v2.0_Chr5g0082001 Rosa chinensis HOM05D000687 ORTHO05D000515 2.2e-16 88.6 46 89.1
RcHm_v2.0_Chr5g0082531 Rosa chinensis HOM05D000687 ORTHO05D000515 4.9e-16 87.4 46 89.1
FAN11G1656 Fragaria x ananassa HOM05D000687 ORTHO05D000515 6.4e-16 87.0 49 77.6
FAN21G1817 Fragaria x ananassa HOM05D000687 ORTHO05D000515 6.4e-16 87.0 46 82.6
FAN25G0545 Fragaria x ananassa HOM05D000687 ORTHO05D000515 1.1e-15 86.3 46 82.6
FvH4_3g45000 Fragaria vesca HOM05D000687 ORTHO05D000515 1.4e-15 85.9 46 80.4
FAN11G2123 Fragaria x ananassa HOM05D000687 ORTHO05D000515 3.2e-15 84.7 46 78.3
FvH4_3g44990 Fragaria vesca HOM05D000687 ORTHO05D000515 1.3e-13 79.3 41 82.9
MD11G1010900 Malus domestica HOM05D000687 ORTHO05D000515 6.2e-11 70.5 61 57.4
Prupe.6G009400 Prunus persica HOM05D000687 ORTHO05D000515 6.2e-11 70.5 39 79.5
RcHm_v2.0_Chr5g0082211 Rosa chinensis HOM05D000687 ORTHO05D000515 8.1e-11 70.1 35 91.4
RcHm_v2.0_Chr5g0081981 Rosa chinensis HOM05D000687 ORTHO05D000515 2.4e-10 68.6 35 88.6
CiPaw.13G174400 Carya illinoinensis HOM05D000687 ORTHO05D000515 5.3e-10 67.4 43 69.8
MD03G1007700 Malus domestica HOM05D000687 ORTHO05D000515 5.3e-10 67.4 39 76.9
Haze_22980 Corylus avellana HOM05D000687 ORTHO05D000515 1.5e-09 65.9 43 69.8
QL01p008041 Quercus lobata HOM05D000687 ORTHO05D000515 6.5e-08 60.5 39 64.1
Nn7g35923 Nelumbo nucifera HOM05D000687 ORTHO05D000515 5.5e-07 57.4 43 60.5
DCAR_024335 Daucus carota HOM05D000687 ORTHO05D000515 2.1e-06 55.5 43 53.5
Eucgr.J01800 Eucalyptus grandis HOM05D000687 ORTHO05D000515 2.1e-06 55.5 34 73.5
Thecc.09G211300 Theobroma cacao HOM05D000687 ORTHO05D000515 4.6e-06 54.3 36 63.9
TPR.G11818 Trifolium pratense HOM05D000687 ORTHO05D000515 6.0e-06 53.9 38 60.5


User provided reference genes

Program Settings