Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0081341 Rosa chinensis HOM05D000007 ORTHO05D000017 1.7e-69 265.8 126 100.0
FvH4_3g44660 Fragaria vesca HOM05D000007 ORTHO05D000017 6.6e-45 184.1 129 69.8
FAN25G2917 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.5e-44 182.2 128 68.8
FAN25G2493 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.5e-41 170.6 131 67.2
FvH4_3g45161 Fragaria vesca HOM05D000007 ORTHO05D000017 7.1e-39 164.1 127 64.6
FAN21G0670 Fragaria x ananassa HOM05D000870 ORTHO05D000715 9.2e-39 163.7 114 68.4
FvH4_3g01100 Fragaria vesca HOM05D000007 ORTHO05D000017 6.0e-38 161.0 132 64.4
FAN16G0155 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.6e-37 157.5 129 62.0
FvH4_3g44671 Fragaria vesca HOM05D000007 ORTHO05D000017 3.9e-29 131.7 103 62.1
RcHm_v2.0_Chr5g0059111 Rosa chinensis HOM05D000007 ORTHO05D000017 3.6e-27 125.2 133 50.4
RcHm_v2.0_Chr5g0059201 Rosa chinensis HOM05D000007 ORTHO05D000017 4.7e-27 124.8 133 50.4
RcHm_v2.0_Chr5g0059211 Rosa chinensis HOM05D000007 ORTHO05D000017 1.9e-23 112.8 128 48.4
RcHm_v2.0_Chr5g0059551 Rosa chinensis HOM05D000007 ORTHO05D000017 1.9e-23 112.8 129 48.8
RcHm_v2.0_Chr5g0059291 Rosa chinensis HOM05D000007 ORTHO05D000017 8.7e-21 104.0 131 47.3
FvH4_3g44560 Fragaria vesca HOM05D000007 ORTHO05D000017 1.5e-20 103.2 69 73.9
FAN16G3363 Fragaria x ananassa HOM05D003064 ORTHO05D001733 9.6e-20 100.5 80 57.5
RcHm_v2.0_Chr5g0053901 Rosa chinensis HOM05D000007 ORTHO05D000017 9.6e-20 100.5 133 45.9
RcHm_v2.0_Chr3g0475411 Rosa chinensis HOM05D000007 ORTHO05D000017 1.3e-19 100.1 134 43.3
FvH4_3g32390 Fragaria vesca HOM05D000007 ORTHO05D035417 8.1e-19 97.4 128 44.5
RcHm_v2.0_Chr2g0101031 Rosa chinensis HOM05D000007 ORTHO05D000017 8.1e-19 97.4 131 42.7
FvH4_3g32350 Fragaria vesca HOM05D000007 ORTHO05D000017 1.3e-16 90.1 132 41.7
RcHm_v2.0_Chr2g0107881 Rosa chinensis HOM05D000007 ORTHO05D000017 8.4e-16 87.4 127 45.7
RcHm_v2.0_Chr2g0107801 Rosa chinensis HOM05D000007 ORTHO05D000017 1.1e-15 87.0 127 44.9
FAN19G3196 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.2e-14 83.6 127 41.7
RcHm_v2.0_Chr2g0107891 Rosa chinensis HOM05D000007 ORTHO05D000017 2.1e-14 82.8 128 44.5
RcHm_v2.0_Chr2g0107851 Rosa chinensis HOM05D000007 ORTHO05D000017 3.5e-14 82.0 116 43.1
RcHm_v2.0_Chr5g0059301 Rosa chinensis HOM05D000007 ORTHO05D035417 3.5e-14 82.0 87 55.2
RcHm_v2.0_Chr2g0107811 Rosa chinensis HOM05D000007 ORTHO05D000017 4.6e-14 81.6 127 44.1
RcHm_v2.0_Chr2g0107781 Rosa chinensis HOM05D000007 ORTHO05D000017 1.7e-13 79.7 105 49.5
FvH4_6g14980 Fragaria vesca HOM05D000007 ORTHO05D000017 3.0e-13 79.0 132 40.2
FvH4_2g36710 Fragaria vesca HOM05D000007 ORTHO05D000017 8.7e-13 77.4 133 39.8
FvH4_6g15010 Fragaria vesca HOM05D000007 ORTHO05D000017 1.1e-12 77.0 123 37.4
FAN23G0995 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-12 77.0 120 39.2
FAN23G2883 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-12 77.0 127 39.4
RcHm_v2.0_Chr2g0107841 Rosa chinensis HOM05D000007 ORTHO05D000017 1.9e-12 76.3 130 40.0
RcHm_v2.0_Chr5g0059321 Rosa chinensis HOM05D000007 ORTHO05D035417 1.9e-12 76.3 89 49.4
FvH4_2g36711 Fragaria vesca HOM05D000007 ORTHO05D000017 3.3e-12 75.5 133 39.8
FAN23G2354 Fragaria x ananassa HOM05D000007 ORTHO05D029656 3.3e-12 75.5 116 37.1
RcHm_v2.0_Chr2g0107821 Rosa chinensis HOM05D000007 ORTHO05D000017 7.4e-12 74.3 127 40.9
FvH4_1g18391 Fragaria vesca HOM05D000007 ORTHO05D000017 1.3e-11 73.6 140 37.1
FAN09G3188 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-11 73.6 132 38.6
FAN15G1356 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.3e-11 73.6 133 39.1
FvH4_1g17550 Fragaria vesca HOM05D000007 ORTHO05D000017 1.6e-11 73.2 120 40.0
FAN27G2044 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.1e-11 72.8 133 39.1
FvH4_2g36701 Fragaria vesca HOM05D000007 ORTHO05D000017 3.6e-11 72.0 131 35.1
FAN09G0908 Fragaria x ananassa HOM05D000082 ORTHO05D009107 3.6e-11 72.0 131 38.2
FvH4_1g17570 Fragaria vesca HOM05D000007 ORTHO05D000017 8.1e-11 70.9 114 38.6
FAN19G2602 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-10 70.5 114 37.7
FvH4_1g17540 Fragaria vesca HOM05D000007 ORTHO05D000017 2.4e-10 69.3 117 36.8
FvH4_1g18430 Fragaria vesca HOM05D000007 ORTHO05D000017 2.4e-10 69.3 136 37.5
FAN26G1364 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-10 69.3 101 42.6
FAN14G3180 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.0e-10 68.6 107 36.4
FAN20G2365 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.0e-10 68.6 118 39.8
FAN11G2942 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.2e-09 67.0 131 38.2
FvH4_6g14972 Fragaria vesca HOM05D000007 ORTHO05D000017 1.5e-09 66.6 107 35.5
FvH4_1g13760 Fragaria vesca HOM05D000007 ORTHO05D035254 2.0e-09 66.2 119 36.1
Prupe.6G214900 Prunus persica HOM05D000007 ORTHO05D000017 2.0e-09 66.2 123 31.7
RcHm_v2.0_Chr2g0109731 Rosa chinensis HOM05D000007 ORTHO05D000017 2.0e-09 66.2 144 34.7
FvH4_4g30361 Fragaria vesca HOM05D000007 ORTHO05D000017 3.4e-09 65.5 134 38.1
FAN19G2319 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-09 65.1 100 41.0
FAN27G1786 Fragaria x ananassa HOM05D000007 ORTHO05D029656 4.5e-09 65.1 117 38.5
FvH4_1g17560 Fragaria vesca HOM05D000007 ORTHO05D000017 5.8e-09 64.7 103 37.9
FvH4_1g18470 Fragaria vesca HOM05D000007 ORTHO05D000017 5.8e-09 64.7 116 35.3
FvH4_3g14941 Fragaria vesca HOM05D000007 ORTHO05D000017 5.8e-09 64.7 57 52.6
FvH4_6g14900 Fragaria vesca HOM05D000007 ORTHO05D000017 1.3e-08 63.5 128 35.2
FAN26G1843 Fragaria x ananassa HOM05D000001 ORTHO05D009432 1.3e-08 63.5 117 34.2
FAN03G2907 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.7e-08 63.2 125 35.2
FAN23G1980 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.7e-08 63.2 96 40.6
FvH4_2g05890 Fragaria vesca HOM05D020036 ORTHO05D013322 2.9e-08 62.4 112 35.7
FAN26G2312 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.9e-08 61.6 119 35.3
FvH4_1g18870 Fragaria vesca HOM05D000007 ORTHO05D000017 8.4e-08 60.8 79 46.8
FvH4_3g14954 Fragaria vesca HOM05D000007 ORTHO05D000017 8.4e-08 60.8 122 40.2
FvH4_6g14993 Fragaria vesca HOM05D000007 ORTHO05D000017 8.4e-08 60.8 122 34.4
FvH4_3g24880 Fragaria vesca HOM05D000007 ORTHO05D000017 1.1e-07 60.5 123 31.7
FAN11G0961 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-07 60.5 123 31.7
FAN28G0093 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.1e-07 60.5 111 34.2
RcHm_v2.0_Chr2g0109761 Rosa chinensis HOM05D000007 ORTHO05D000017 1.1e-07 60.5 148 33.1
FvH4_1g13750 Fragaria vesca HOM05D000007 ORTHO05D035254 1.4e-07 60.1 96 37.5
FAN03G2258 Fragaria x ananassa HOM05D000007 ORTHO05D029656 1.4e-07 60.1 125 34.4
FAN19G0773 Fragaria x ananassa HOM05D000007 ORTHO05D035254 1.4e-07 60.1 96 37.5
FvH4_1g13860 Fragaria vesca HOM05D000007 ORTHO05D000017 1.9e-07 59.7 116 33.6
FAN16G2932 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.9e-07 59.7 122 39.3
FAN24G2623 Fragaria x ananassa HOM05D020036 ORTHO05D013322 1.9e-07 59.7 90 37.8
FAN11G0467 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-07 59.3 122 39.3
FAN21G3529 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.4e-07 59.3 123 30.9
Peaxi162Scf00095g00526 Petunia axillaris HOM05D000007 ORTHO05D000017 2.4e-07 59.3 116 31.0
Prupe.6G214700 Prunus persica HOM05D000007 ORTHO05D000017 2.4e-07 59.3 93 37.6
FvH4_6g19961 Fragaria vesca HOM05D000007 ORTHO05D000017 3.2e-07 58.9 90 38.9
FAN06G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.5e-07 58.2 123 30.9
FAN14G5209 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.5e-07 58.2 105 35.2
FAN12G1497 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.1e-07 57.8 132 37.1
FAN14G5312 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.3e-07 57.4 104 37.5
RcHm_v2.0_Chr7g0211081 Rosa chinensis HOM05D000007 ORTHO05D000017 1.2e-06 57.0 89 44.9
FAN06G0788 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.6e-06 56.6 121 30.6
FAN26G3382 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.6e-06 56.6 91 35.2
FAN05G2368 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.1e-06 56.2 117 35.9
RcHm_v2.0_Chr1g0361131 Rosa chinensis HOM05D000007 ORTHO05D000017 2.1e-06 56.2 114 36.0
FvH4_7g29450 Fragaria vesca HOM05D000007 ORTHO05D029656 2.7e-06 55.8 132 29.5
FAN02G2033 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.7e-06 55.8 112 33.9
FvH4_1g13820 Fragaria vesca HOM05D005839 ORTHO05D005686 3.5e-06 55.5 121 36.4
FAN17G2535 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.5e-06 55.5 130 38.5
FvH4_1g13770 Fragaria vesca HOM05D000007 ORTHO05D000017 6.0e-06 54.7 65 41.5
FvH4_3g14940 Fragaria vesca HOM05D000007 ORTHO05D000017 6.0e-06 54.7 58 46.6
FAN28G1569 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.9e-06 54.3 79 38.0


User provided reference genes

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