Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0080871 Rosa chinensis HOM05D000146 ORTHO05D346459 1.5e-90 336.3 182 100.0
FvH4_3g00260 Fragaria vesca HOM05D000146 ORTHO05D000178 4.6e-31 138.7 117 66.7
RcHm_v2.0_Chr5g0000381 Rosa chinensis HOM05D000146 ORTHO05D000178 3.0e-30 136.0 117 65.8
FAN21G1777 Fragaria x ananassa HOM05D000146 ORTHO05D000178 1.9e-29 133.3 116 64.7
FAN25G3241 Fragaria x ananassa HOM05D000146 ORTHO05D000178 8.1e-28 127.9 116 62.9
Prupe.4G002900 Prunus persica HOM05D000146 ORTHO05D000178 1.4e-27 127.1 113 64.6
MD10G1339900 Malus domestica HOM05D000146 ORTHO05D000178 1.6e-23 113.6 111 63.1
Thecc.06G241900 Theobroma cacao HOM05D000146 ORTHO05D000178 9.3e-16 87.8 112 49.1
Ciclev10014638m.g Citrus clementina HOM05D000146 ORTHO05D000178 7.9e-15 84.7 116 49.1
Potri.016G004900 Populus trichocarpa HOM05D000146 ORTHO05D000178 1.3e-14 84.0 116 47.4
Haze_07035 Corylus avellana HOM05D000146 ORTHO05D000178 3.9e-14 82.4 113 48.7
Cfa000023 Carpinus fangiana HOM05D000146 ORTHO05D000178 4.3e-13 79.0 117 46.2
Duzib192G1065 Durio zibethinus HOM05D000146 ORTHO05D000178 7.4e-13 78.2 112 45.5
Sabra16G0009800 Salix brachista HOM05D000146 ORTHO05D000178 9.6e-13 77.8 116 44.8
CANSAT56G1985 Cannabis sativa HOM05D000146 ORTHO05D000178 1.6e-12 77.0 94 55.3
Atru.chr1.2244 Acer truncatum HOM05D000146 ORTHO05D000178 2.8e-12 76.3 116 44.0
TAR629G0572 Trochodendron aralioides HOM05D000146 ORTHO05D000178 3.6e-12 75.9 113 43.4
Cpa.g.sc27.215 Carica papaya HOM05D000146 ORTHO05D000178 1.4e-11 73.9 112 44.6
CiPaw.10G083000 Carya illinoinensis HOM05D000146 ORTHO05D000178 1.4e-11 73.9 113 43.4
Dinv07151 Davidia involucrata HOM05D000146 ORTHO05D000178 1.4e-11 73.9 108 45.4
CiPaw.09G109700 Carya illinoinensis HOM05D000146 ORTHO05D000178 1.8e-11 73.6 117 45.3
Potri.006G003800 Populus trichocarpa HOM05D000146 ORTHO05D000178 3.1e-11 72.8 108 46.3
RcHm_v2.0_Chr5g0000351 Rosa chinensis HOM05D000146 ORTHO05D000178 4.0e-11 72.4 51 76.5
Hma1.2p1_1175F.1_g264130 Hydrangea macrophylla HOM05D000146 ORTHO05D000178 2.6e-10 69.7 105 44.8
COL.COLO4_31947 Corchorus olitorius HOM05D000146 ORTHO05D000178 4.5e-10 68.9 117 40.2
Manes.09G084000 Manihot esculenta HOM05D000146 ORTHO05D000178 7.6e-10 68.2 101 40.6
Phvul.006G136500 Phaseolus vulgaris HOM05D000146 ORTHO05D000178 9.9e-10 67.8 113 44.2
Eucgr.E03840 Eucalyptus grandis HOM05D000146 ORTHO05D000178 1.7e-09 67.0 117 40.2
RcHm_v2.0_Chr2g0117291 Rosa chinensis HOM05D010729 ORTHO05D000001 2.9e-09 66.2 44 70.5
Nn1g07546 Nelumbo nucifera HOM05D000146 ORTHO05D000178 3.8e-09 65.9 117 43.6
Gohir.A06G203500 Gossypium hirsutum HOM05D000146 ORTHO05D000178 4.9e-09 65.5 108 46.3
Gohir.D06G218200 Gossypium hirsutum HOM05D000146 ORTHO05D000178 4.9e-09 65.5 108 46.3
Gorai.010G248100 Gossypium raimondii HOM05D000146 ORTHO05D000178 4.9e-09 65.5 108 46.3
Sabra06G0003200 Salix brachista HOM05D000146 ORTHO05D000178 4.9e-09 65.5 116 41.4
VMungo0540G2488 Vigna mungo HOM05D000146 ORTHO05D000178 6.4e-09 65.1 109 45.0
Eucgr.L00145 Eucalyptus grandis HOM05D000146 ORTHO05D000178 1.1e-08 64.3 114 41.2
Lj6g0014132 Lotus japonicus HOM05D000146 ORTHO05D000178 1.1e-08 64.3 112 46.4
arahy.Tifrunner.gnm1.ann1.N3G4JZ Arachis hypogaea HOM05D000146 ORTHO05D000178 1.9e-08 63.5 115 43.5
QL05p066926 Quercus lobata HOM05D000146 ORTHO05D000178 3.2e-08 62.8 116 42.2
TAR516G0008 Trochodendron aralioides HOM05D000146 ORTHO05D000178 4.2e-08 62.4 106 41.5
TAR517G0006 Trochodendron aralioides HOM05D000146 ORTHO05D000178 4.2e-08 62.4 106 41.5
arahy.Tifrunner.gnm1.ann1.VMI9EH Arachis hypogaea HOM05D000146 ORTHO05D000178 1.6e-07 60.5 115 42.6
MELO3C008002.2 Cucumis melo HOM05D000146 ORTHO05D000178 2.1e-07 60.1 93 47.3
Duzib235G0099 Durio zibethinus HOM05D000146 ORTHO05D000178 2.7e-07 59.7 90 43.3
CsaV3_6G048190 Cucumis sativus L. HOM05D000146 ORTHO05D000178 3.5e-07 59.3 93 47.3
ClCG01G021180 Citrullus lanatus HOM05D000146 ORTHO05D000178 1.0e-06 57.8 93 47.3
Dinv40876 Davidia involucrata HOM05D000146 ORTHO05D000178 1.3e-06 57.4 109 38.5
Ca_00770_v3 Cicer arietinum L. HOM05D000146 ORTHO05D000178 3.0e-06 56.2 108 42.6
Rhsim02G0090100 Rhododendron simsii HOM05D000146 ORTHO05D000178 3.0e-06 56.2 103 37.9


User provided reference genes

Program Settings